RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 PDGFRBP09619 1106 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 ACRP10323 421 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 EPB41P11171 864 aaKnown RBP7.9□□□□□ -1.14
GPNMB-209ENST00000474157 VEGFAP15692 232 aaPredicted RBP7.9□□□□□ -1.14
GPNMB-209ENST00000474157 RAG1P15918 1043 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 CA8P35219 290 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 CHRNA4P43681 627 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 CLK1P49759 484 aaKnown RBP7.9□□□□□ -1.14
GPNMB-209ENST00000474157 CASP7P55210 303 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 APBA1Q02410 837 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 SERINC3Q13530 473 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 SLBPQ14493 270 aaKnown RBP eCLIP7.9□□□□□ -1.14
GPNMB-209ENST00000474157 SAFBQ15424 915 aaKnown RBP eCLIP7.9□□□□□ -1.14
GPNMB-209ENST00000474157 CFAP100Q494V2 611 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 COBLL1Q53SF7 1204 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 PRAMEF13Q5VWM6 474 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 CDCP2Q5VXM1 449 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 NCAPH2Q6IBW4 605 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 CCDC174Q6PII3 467 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 TTC6Q86TZ1 520 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 ERICH1Q86X53 443 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 SLFN12Q8IYM2 578 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 SAMD14Q8IZD0 417 aaPredicted RBP7.9□□□□□ -1.14
GPNMB-209ENST00000474157 C19orf47Q8N9M1 422 aaKnown RBP7.9□□□□□ -1.14
GPNMB-209ENST00000474157 SCAIQ8N9R8 606 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 FBLIM1Q8WUP2 373 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 WDR60Q8WVS4 1066 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 NCSTNQ92542 709 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 MAML1Q92585 1016 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 USP6NLQ92738 828 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 IL17RAQ96F46 866 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 CDC5LQ99459 802 aaKnown RBP7.9□□□□□ -1.14
GPNMB-209ENST00000474157 MAP3K14Q99558 947 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 CCT7Q99832 543 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 PUS3Q9BZE2 481 aaKnown RBP7.9□□□□□ -1.14
GPNMB-209ENST00000474157 ZSWIM4Q9H7M6 989 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 ANO10Q9NW15 660 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 GTF3C4Q9UKN8 822 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 PCOLCE2Q9UKZ9 415 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 TMCC3Q9ULS5 477 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 CPSF1Q10570 1443 aaKnown RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 TTC21BQ7Z4L5 1316 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 A0A0G2JLW4 131 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 A0A1W2PQH9 124 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 HTR3EA5X5Y0 456 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 FAM86C2PA6NEL3 165 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 TNFRSF10CO14798 259 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 MTA2O94776 668 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 ANP32DO95626 131 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 MAP4K4O95819 1239 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 HSPA8P11142 646 aaKnown RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 POLR2BP30876 1174 aaKnown RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 ZNF131P52739 623 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 LBX1P52954 281 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 BASP1P80723 227 aaKnown RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 WASHC5Q12768 1159 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 IKQ13123 557 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 ZYXQ15942 572 aaKnown RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 SMUG1Q53HV7 270 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 KLC3Q6P597 504 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 C6orf89Q6UWU4 347 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 FAM228AQ86W67 206 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 DZIP1LQ8IYY4 767 aaKnown RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 PHACTR4Q8IZ21 702 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 SLC7A5P1Q8MH63 180 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 TAB3Q8N5C8 712 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 CELF2-AS1Q8N7Q2 184 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 DEPTORQ8TB45 409 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 RNPC3Q96LT9 517 aaKnown RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 SLC9A7Q96T83 725 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 NDNQ99608 321 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 SPOCK3Q9BQ16 436 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 NAA15Q9BXJ9 866 aaKnown RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 SEMA6CQ9H3T2 930 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 AS3MTQ9HBK9 375 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 LGR6Q9HBX8 967 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 TRMT1Q9NXH9 659 aaKnown RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 SLC5A4Q9NY91 659 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 RNF181Q9P0P0 153 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 LARSQ9P2J5 1176 aaKnown RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 DDX19BQ9UMR2 479 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 SCAF8Q9UPN6 1271 aaKnown RBP7.89□□□□□ -1.15
GPNMB-209ENST00000474157 LZTS1Q9Y250 596 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 FADS3Q9Y5Q0 445 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 NR2E3Q9Y5X4 410 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 SCINQ9Y6U3 715 aa7.89□□□□□ -1.15
GPNMB-209ENST00000474157 KIF24Q5T7B8 1368 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 USP47Q96K76 1375 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 ANKRD65E5RJM6 399 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 H0YC42 278 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 CHL1O00533 1208 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 SGTAO43765 313 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 ATP6V1G2O95670 118 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 CST3P01034 146 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 HNRNPCP07910 306 aaKnown RBP eCLIP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 NFICP08651 508 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 BMP3P12645 472 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 CAP2P40123 477 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 TPD52P55327 224 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 BIRC3Q13489 604 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms