RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 GSTCDQ8NEC7 633 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 ZFP28Q8NHY6 868 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 TFAP2CQ92754 450 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 CDC5LQ99459 802 aaKnown RBP3.22□□□□□ -1.89
CCDC39-203ENST00000473854 TEX101Q9BY14 249 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 REXO4Q9GZR2 422 aaKnown RBP3.22□□□□□ -1.89
CCDC39-203ENST00000473854 INTS7Q9NVH2 962 aaKnown RBP3.22□□□□□ -1.89
CCDC39-203ENST00000473854 FLRT1Q9NZU1 646 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 NDOR1Q9UHB4 597 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 MAP3K2Q9Y2U5 619 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 MRPS23Q9Y3D9 190 aaKnown RBP3.22□□□□□ -1.89
CCDC39-203ENST00000473854 KAT6AQ92794 2004 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 SALL3Q9BXA9 1300 aa3.21□□□□□ -1.89
CCDC39-203ENST00000473854 CCDC151A5D8V7 595 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 H7C1D1 291 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 KLF4O43474 513 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 KRT37O76014 449 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 PRKCGP05129 697 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 CLEC2LP0C7M8 214 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 WT1P19544 449 aaPredicted RBP3.21□□□□□ -1.9
CCDC39-203ENST00000473854 XPAP23025 273 aaPredicted RBP3.21□□□□□ -1.9
CCDC39-203ENST00000473854 TKTP29401 623 aaKnown RBP3.21□□□□□ -1.9
CCDC39-203ENST00000473854 PROK1P58294 105 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 TUBA4AP68366 448 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 APBA1Q02410 837 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 SSRP1Q08945 709 aaKnown RBP3.21□□□□□ -1.9
CCDC39-203ENST00000473854 SCAPQ12770 1279 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 FHL1Q13642 323 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 CCDC178Q5BJE1 867 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 C11orf87Q6NUJ2 197 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 THNSL2Q86YJ6 484 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 ZZZ3Q8IYH5 903 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 FAM43AQ8N2R8 423 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 PIK3C3Q8NEB9 887 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 SARAFQ96BY9 339 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 TIMP4Q99727 224 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 SOX7Q9BT81 388 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 WACQ9BTA9 647 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 VPS33BQ9H267 617 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 SLC52A2Q9HAB3 445 aa3.21□□□□□ -1.9
CCDC39-203ENST00000473854 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.2□□□□□ -1.9
CCDC39-203ENST00000473854 WIPF3A6NGB9 483 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 TBKBP1A7MCY6 615 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 B4E1Z4 1266 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 PRPF6O94906 941 aaKnown RBP3.2□□□□□ -1.9
CCDC39-203ENST00000473854 FOXG1P55316 489 aaPredicted RBP3.2□□□□□ -1.9
CCDC39-203ENST00000473854 NRG3P56975 720 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 RAB33AQ14088 237 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 MTERF2Q49AM1 385 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 TRIM61Q5EBN2 209 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 AGAP9Q5VTM2 703 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 PDZD4Q76G19 769 aaPredicted RBP3.2□□□□□ -1.9
CCDC39-203ENST00000473854 DDX53Q86TM3 631 aaKnown RBP3.2□□□□□ -1.9
CCDC39-203ENST00000473854 MAPKAPK5Q8IW41 473 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 RHOT2Q8IXI1 618 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 CDYL2Q8N8U2 506 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 IGSF22Q8N9C0 903 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 BOD1Q96IK1 185 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 EXOC2Q96KP1 924 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 AIFM2Q9BRQ8 373 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 TRIM55Q9BYV6 548 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 GALNT9Q9HCQ5 603 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 TMEM74BQ9NUR3 256 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 ASB6Q9NWX5 421 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 WWOXQ9NZC7 414 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 ZNF580Q9UK33 172 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 PCDHB6Q9Y5E3 794 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 ENTPD2Q9Y5L3 495 aa3.2□□□□□ -1.9
CCDC39-203ENST00000473854 H3BNC9 293 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 PDPK1O15530 556 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 APOL3O95236 402 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 LY86O95711 162 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 RANGAP1P46060 587 aaPredicted RBP3.19□□□□□ -1.9
CCDC39-203ENST00000473854 GPR15P49685 360 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 SLC10A2Q12908 348 aaPredicted RBP3.19□□□□□ -1.9
CCDC39-203ENST00000473854 EIF2B5Q13144 721 aaKnown RBP3.19□□□□□ -1.9
CCDC39-203ENST00000473854 RASGRF1Q13972 1273 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 MTX3Q5HYI7 312 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 RUSC1-AS1Q66K80 236 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 MCF2L2Q86YR7 1114 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 TMEM132CQ8N3T6 1108 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 KIAA1958Q8N8K9 716 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 RPL36ALQ969Q0 106 aaKnown RBP3.19□□□□□ -1.9
CCDC39-203ENST00000473854 RGMAQ96B86 450 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 SEMA4CQ9C0C4 833 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 TBC1D30Q9Y2I9 924 aa3.19□□□□□ -1.9
CCDC39-203ENST00000473854 CACNA1IQ9P0X4 2223 aa3.18□□□□□ -1.9
CCDC39-203ENST00000473854 ST20-MTHFSA0A0A6YYL1 179 aa3.18□□□□□ -1.9
CCDC39-203ENST00000473854 MECP2P51608 486 aaKnown RBP3.18□□□□□ -1.9
CCDC39-203ENST00000473854 SSBP2P81877 361 aaPredicted RBP3.18□□□□□ -1.9
CCDC39-203ENST00000473854 CD69Q07108 199 aa3.18□□□□□ -1.9
CCDC39-203ENST00000473854 RAPGEF1Q13905 1077 aa3.18□□□□□ -1.9
CCDC39-203ENST00000473854 LLGL1Q15334 1064 aa3.18□□□□□ -1.9
CCDC39-203ENST00000473854 TMCO4Q5TGY1 634 aa3.18□□□□□ -1.9
CCDC39-203ENST00000473854 LMBR1LQ6UX01 489 aa3.18□□□□□ -1.9
CCDC39-203ENST00000473854 SPATC1Q76KD6 591 aa3.18□□□□□ -1.9
CCDC39-203ENST00000473854 CHST14Q8NCH0 376 aa3.18□□□□□ -1.9
CCDC39-203ENST00000473854 OR56A1Q8NGH5 318 aa3.18□□□□□ -1.9
CCDC39-203ENST00000473854 RNF31Q96EP0 1072 aa3.18□□□□□ -1.9
CCDC39-203ENST00000473854 MYL10Q9BUA6 226 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms