RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 PPFIBP1Q86W92 1011 aa13.23□□□□□ -0.29
SMPD4-217ENST00000473720 IFNLR1Q8IU57 520 aaPredicted RBP13.23□□□□□ -0.29
SMPD4-217ENST00000473720 TDRD5Q8NAT2 981 aaKnown RBP13.23□□□□□ -0.29
SMPD4-217ENST00000473720 KREMEN2Q8NCW0 462 aa13.23□□□□□ -0.29
SMPD4-217ENST00000473720 MCPH1Q8NEM0 835 aa13.23□□□□□ -0.29
SMPD4-217ENST00000473720 CCDC51Q96ER9 411 aa13.23□□□□□ -0.29
SMPD4-217ENST00000473720 B3GALT6Q96L58 329 aa13.23□□□□□ -0.29
SMPD4-217ENST00000473720 ZSCAN31Q96LW9 406 aaPredicted RBP13.23□□□□□ -0.29
SMPD4-217ENST00000473720 NACC1Q96RE7 527 aa13.23□□□□□ -0.29
SMPD4-217ENST00000473720 POLR3CQ9BUI4 534 aaPredicted RBP13.23□□□□□ -0.29
SMPD4-217ENST00000473720 FOXP1Q9H334 677 aaPredicted RBP13.23□□□□□ -0.29
SMPD4-217ENST00000473720 SMOC2Q9H3U7 446 aa13.23□□□□□ -0.29
SMPD4-217ENST00000473720 NOL7Q9UMY1 257 aaKnown RBP13.23□□□□□ -0.29
SMPD4-217ENST00000473720 USP20Q9Y2K6 914 aa13.23□□□□□ -0.29
SMPD4-217ENST00000473720 GIT1Q9Y2X7 761 aa13.23□□□□□ -0.29
SMPD4-217ENST00000473720 IRAK3Q9Y616 596 aa13.23□□□□□ -0.29
SMPD4-217ENST00000473720 SPATA31D3P0C874 917 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 XRCC6P12956 609 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMPD4-217ENST00000473720 RPA1P27694 616 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 GLUD2P49448 558 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 CLCN4P51793 760 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 IER5LQ5T953 404 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 SPATA31D4Q6ZUB0 917 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 NOSTRINQ8IVI9 506 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 FBXO18Q8NFZ0 1043 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 DEPTORQ8TB45 409 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 HASPINQ8TF76 798 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 BSNDQ8WZ55 320 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 HERC2P3Q9BVR0 1158 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 COLEC11Q9BWP8 271 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 NFKBIZQ9BYH8 718 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 SFXN1Q9H9B4 322 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 MAN1C1Q9NR34 630 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 PRMT7Q9NVM4 692 aaPredicted RBP13.22□□□□□ -0.29
SMPD4-217ENST00000473720 LIMD1Q9UGP4 676 aa13.22□□□□□ -0.29
SMPD4-217ENST00000473720 A0A1B0GUA9 196 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 PDGFBP01127 241 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-217ENST00000473720 PRKCBP05771 671 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 RBM25P49756 843 aaKnown RBP13.21□□□□□ -0.29
SMPD4-217ENST00000473720 NHLH1Q02575 133 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 DSC1Q08554 894 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 PRPF4BQ13523 1007 aaKnown RBP13.21□□□□□ -0.29
SMPD4-217ENST00000473720 ECM1Q16610 540 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 C8orf34Q49A92 452 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 HAUS3Q68CZ6 603 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 PALB2Q86YC2 1186 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 FBXL6Q8N531 539 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 ASIC4Q96FT7 647 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 KIFC3Q9BVG8 833 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 BHMT2Q9H2M3 363 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 SH2B1Q9NRF2 756 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-217ENST00000473720 SNTG2Q9NY99 539 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 STK39Q9UEW8 545 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 LRWD1Q9UFC0 647 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 SORCS3Q9UPU3 1222 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 SSX2IPQ9Y2D8 614 aa13.21□□□□□ -0.29
SMPD4-217ENST00000473720 CASTOR2A6NHX0 329 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 N4BP3O15049 544 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 TEX28O15482 410 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 TADA2AO75478 443 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 BRD1O95696 1058 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 ADH1AP07327 375 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 RPL17P18621 184 aaKnown RBP13.2□□□□□ -0.3
SMPD4-217ENST00000473720 VCPP55072 806 aaKnown RBP13.2□□□□□ -0.3
SMPD4-217ENST00000473720 GRIK3Q13003 919 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 MTMR3Q13615 1198 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 ZRSR1Q15695 479 aaKnown RBP13.2□□□□□ -0.3
SMPD4-217ENST00000473720 MAPK6Q16659 721 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 MCTP1Q6DN14 999 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 FUT10Q6P4F1 479 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 BMP8AQ7Z5Y6 402 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 SNX29Q8TEQ0 813 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 IFT74Q96LB3 600 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 KIF2CQ99661 725 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 PAAF1Q9BRP4 392 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 ADPGKQ9BRR6 497 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 GPR62Q9BZJ7 368 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 C2orf40Q9H1Z8 148 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 PDZD7Q9H5P4 517 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 DDX19AQ9NUU7 478 aaKnown RBP13.2□□□□□ -0.3
SMPD4-217ENST00000473720 ADAM28Q9UKQ2 775 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 KIAA1024Q9UPX6 916 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 GDAQ9Y2T3 454 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 PCDHB6Q9Y5E3 794 aa13.2□□□□□ -0.3
SMPD4-217ENST00000473720 TCHHQ07283 1943 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 ZDBF2Q9HCK1 2354 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 CCDC195A0A1B0GUA6 201 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 INPPL1O15357 1258 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 LILRB3O75022 631 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 GLUD1P00367 558 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 EDN1P05305 212 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 CYP11B2P19099 503 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 MRE11P49959 708 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 PTGDRQ13258 359 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 KIAA0319Q5VV43 1072 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 CDCA2Q69YH5 1023 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-217ENST00000473720 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 CCDC149Q6ZUS6 474 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 GPR149Q86SP6 731 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms