RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 EARS2Q5JPH6 523 aaKnown RBP14.09□□□□□ -0.15
TRAF4-209ENST00000473421 PHLDB3Q6NSJ2 640 aa14.09□□□□□ -0.15
TRAF4-209ENST00000473421 POTEHQ6S545 545 aa14.09□□□□□ -0.15
TRAF4-209ENST00000473421 DGLUCYQ7Z3D6 616 aa14.09□□□□□ -0.15
TRAF4-209ENST00000473421 C1orf210Q8IVY1 113 aa14.09□□□□□ -0.15
TRAF4-209ENST00000473421 ASAP3Q8TDY4 903 aa14.09□□□□□ -0.15
TRAF4-209ENST00000473421 PSPC1Q8WXF1 523 aaKnown RBP14.09□□□□□ -0.15
TRAF4-209ENST00000473421 RHOBTB2Q9BYZ6 727 aa14.09□□□□□ -0.15
TRAF4-209ENST00000473421 PRKD2Q9BZL6 878 aa14.09□□□□□ -0.15
TRAF4-209ENST00000473421 KCNMB3Q9NPA1 279 aa14.09□□□□□ -0.15
TRAF4-209ENST00000473421 KLK14Q9P0G3 267 aa14.09□□□□□ -0.15
TRAF4-209ENST00000473421 MYH15Q9Y2K3 1946 aa14.09□□□□□ -0.15
TRAF4-209ENST00000473421 CNTNAP2Q9UHC6 1331 aa14.09□□□□□ -0.15
TRAF4-209ENST00000473421 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 CD72P21854 359 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 CYP4A11Q02928 519 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 SNW1Q13573 536 aaKnown RBP14.08□□□□□ -0.16
TRAF4-209ENST00000473421 EMC2Q15006 297 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 RTP2Q5QGT7 225 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 FUT10Q6P4F1 479 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 DCLRE1AQ6PJP8 1040 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 GRASPQ7Z6J2 395 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-209ENST00000473421 PJA1Q8NG27 643 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 OXER1Q8TDS5 423 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 SLC7A3Q8WY07 619 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 DYDC2Q96IM9 177 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 PIDD1Q9HB75 910 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 NOTCH4Q99466 2003 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 ARID2Q68CP9 1835 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 SPTBN2O15020 2390 aa14.08□□□□□ -0.16
TRAF4-209ENST00000473421 CARNS1A5YM72 827 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 CDC45O75419 566 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 KRT37O76014 449 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 ARF4P18085 180 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-209ENST00000473421 RFX1P22670 979 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 YWHABP31946 246 aaKnown RBP14.07□□□□□ -0.16
TRAF4-209ENST00000473421 PTENP60484 403 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 MBTD1Q05BQ5 628 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 SPIRE1Q08AE8 756 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 NONOQ15233 471 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRAF4-209ENST00000473421 HASPINQ8TF76 798 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 STAMQ92783 540 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 LXNQ9BS40 222 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 CSRNP2Q9H175 543 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 SLKQ9H2G2 1235 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-209ENST00000473421 SLC2A4RGQ9NR83 387 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 DLL3Q9NYJ7 618 aa14.07□□□□□ -0.16
TRAF4-209ENST00000473421 ZMYND10O75800 440 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 P4HBP07237 508 aaKnown RBP14.06□□□□□ -0.16
TRAF4-209ENST00000473421 FSHRP23945 695 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 STARD6P59095 220 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 SSRP1Q08945 709 aaKnown RBP14.06□□□□□ -0.16
TRAF4-209ENST00000473421 STK3Q13188 491 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 CAPSQ13938 189 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 XKR9Q5GH70 373 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 MOXD1Q6UVY6 613 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 CYP26C1Q6V0L0 522 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 C4orf19Q8IY42 314 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 DAGLBQ8NCG7 672 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 ITFG1Q8TB96 612 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 HINFPQ9BQA5 517 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 CLSTN3Q9BQT9 956 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 JPH2Q9BR39 696 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-209ENST00000473421 SEMA4AQ9H3S1 761 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 PLEKHA4Q9H4M7 779 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRAF4-209ENST00000473421 USP20Q9Y2K6 914 aa14.06□□□□□ -0.16
TRAF4-209ENST00000473421 SHISA7A6NL88 538 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 INO80B-WBP1J3KQ70 363 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 WNT7AO00755 349 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 NRG2O14511 850 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-209ENST00000473421 ERLIN2O94905 339 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 SLITRK3O94933 977 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 NPTXRO95502 500 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 RFC5P40937 340 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 RSPO4Q2I0M5 234 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-209ENST00000473421 NCAPH2Q6IBW4 605 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 POTEDQ86YR6 584 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 RUBCNQ92622 972 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 NXPE3Q969Y0 559 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 CNTNAP3BQ96NU0 1288 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 DDX23Q9BUQ8 820 aaKnown RBP14.05□□□□□ -0.16
TRAF4-209ENST00000473421 COLEC11Q9BWP8 271 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 CNTNAP3Q9BZ76 1288 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 HCFC1R1Q9NWW0 138 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 ZDHHC7Q9NXF8 308 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 FNIP2Q9P278 1114 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 STK39Q9UEW8 545 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 ADAM28Q9UKQ2 775 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 SSX2IPQ9Y2D8 614 aa14.05□□□□□ -0.16
TRAF4-209ENST00000473421 PATJQ8NI35 1801 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 VWA8A3KMH1 1905 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 MIA3Q5JRA6 1907 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 CASTOR2A6NHX0 329 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 CCL16O15467 120 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 GLRA2P23416 452 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 ARL2P36404 184 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 PUM1Q14671 1186 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRAF4-209ENST00000473421 EPHA7Q15375 998 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms