RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 URGCPQ8TCY9 931 aa19.93■□□□□ 0.78
SNX4-204ENST00000473417 LRRC15Q8TF66 581 aa19.93■□□□□ 0.78
SNX4-204ENST00000473417 BCL7CQ8WUZ0 217 aaPredicted RBP19.93■□□□□ 0.78
SNX4-204ENST00000473417 SUSD6Q92537 303 aa19.93■□□□□ 0.78
SNX4-204ENST00000473417 CCDC39Q9UFE4 941 aa19.93■□□□□ 0.78
SNX4-204ENST00000473417 C2orf16Q68DN1 1984 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 INO80B-WBP1J3KQ70 363 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 TXLNAP40222 546 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 SLC11A1P49279 550 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 AFF1P51825 1210 aaKnown RBP19.92■□□□□ 0.78
SNX4-204ENST00000473417 LLGL2Q6P1M3 1020 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 C1orf186Q6ZWK4 172 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 DDX53Q86TM3 631 aaKnown RBP19.92■□□□□ 0.78
SNX4-204ENST00000473417 ZNF280BQ86YH2 543 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 VPS52Q8N1B4 723 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 KCNG4Q8TDN1 519 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 EIF2AQ9BY44 585 aaKnown RBP19.92■□□□□ 0.78
SNX4-204ENST00000473417 PANK2Q9BZ23 570 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 GBP3Q9H0R5 595 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 IPPQ9Y573 584 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 ATP6V1DQ9Y5K8 247 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 HCFC2Q9Y5Z7 792 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 IRAK3Q9Y616 596 aa19.92■□□□□ 0.78
SNX4-204ENST00000473417 LOC730098B7Z3J9 87 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 INPPL1O15357 1258 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 CUTAO60888 179 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 DDHD2O94830 711 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 CTSAP10619 480 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 DDIT3P35638 169 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 SLC12A3P55017 1021 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 NUCB2P80303 420 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 RAD51AP2Q09MP3 1159 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 SYCE2Q6PIF2 218 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 RNF135Q8IUD6 432 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 BSNDQ8WZ55 320 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 CASP10Q92851 521 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 CPB2Q96IY4 423 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 PHF7Q9BWX1 381 aaPredicted RBP19.91■□□□□ 0.78
SNX4-204ENST00000473417 VN1R3Q9BXE9 311 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 S1PR5Q9H228 398 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 UBN1Q9NPG3 1134 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 BLOC1S4Q9NUP1 217 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 KANSL3Q9P2N6 904 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 RCOR1Q9UKL0 485 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 MYH11P35749 1972 aa19.91■□□□□ 0.78
SNX4-204ENST00000473417 TECTAO75443 2155 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 LRRIQ4A6NIV6 560 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 CLASP2O75122 1294 aaKnown RBP19.9■□□□□ 0.78
SNX4-204ENST00000473417 HIP1RO75146 1068 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 ITGA4P13612 1032 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 HOXB8P17481 243 aaPredicted RBP19.9■□□□□ 0.78
SNX4-204ENST00000473417 ARF4P18085 180 aaPredicted RBP19.9■□□□□ 0.78
SNX4-204ENST00000473417 ME1P48163 572 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 KRT85P78386 507 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 NCBP1Q09161 790 aaKnown RBP19.9■□□□□ 0.78
SNX4-204ENST00000473417 MCM6Q14566 821 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 BMS1Q14692 1282 aaKnown RBP19.9■□□□□ 0.78
SNX4-204ENST00000473417 CBX2Q14781 532 aaPredicted RBP19.9■□□□□ 0.78
SNX4-204ENST00000473417 HERC4Q5GLZ8 1057 aaPredicted RBP19.9■□□□□ 0.78
SNX4-204ENST00000473417 RRAGBQ5VZM2 374 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 RAD54LQ92698 747 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 KIFAP3Q92845 792 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 TMEM175Q9BSA9 504 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 MUTYHQ9UIF7 546 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 PCDHA7Q9UN72 937 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 MTCL1Q9Y4B5 1905 aaKnown RBP19.9■□□□□ 0.78
SNX4-204ENST00000473417 TRIP11Q15643 1979 aa19.9■□□□□ 0.78
SNX4-204ENST00000473417 NPHP3-ACAD11A0A0J9YXS1 232 aa19.89■□□□□ 0.77
SNX4-204ENST00000473417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.89■□□□□ 0.77
SNX4-204ENST00000473417 B4GALT5O43286 388 aa19.89■□□□□ 0.77
SNX4-204ENST00000473417 CXCL14O95715 111 aa19.89■□□□□ 0.77
SNX4-204ENST00000473417 POMCP01189 267 aa19.89■□□□□ 0.77
SNX4-204ENST00000473417 GIT2Q14161 759 aa19.89■□□□□ 0.77
SNX4-204ENST00000473417 AXDND1Q5T1B0 1012 aaPredicted RBP19.89■□□□□ 0.77
SNX4-204ENST00000473417 ZNF318Q5VUA4 2279 aa19.89■□□□□ 0.77
SNX4-204ENST00000473417 CDCA2Q69YH5 1023 aaPredicted RBP19.89■□□□□ 0.77
SNX4-204ENST00000473417 SHC4Q6S5L8 630 aa19.89■□□□□ 0.77
SNX4-204ENST00000473417 AUTS2Q8WXX7 1259 aa19.89■□□□□ 0.77
SNX4-204ENST00000473417 IFT74Q96LB3 600 aa19.89■□□□□ 0.77
SNX4-204ENST00000473417 STK39Q9UEW8 545 aa19.89■□□□□ 0.77
SNX4-204ENST00000473417 HES2Q9Y543 173 aa19.89■□□□□ 0.77
SNX4-204ENST00000473417 ZMYM2Q9UBW7 1377 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 SFI1A8K8P3 1242 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 GUCY2CP25092 1073 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 CA8P35219 290 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 MLH1P40692 756 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 CACNB1Q02641 598 aaPredicted RBP19.88■□□□□ 0.77
SNX4-204ENST00000473417 PPP2R5AQ15172 486 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 CCDC73Q6ZRK6 1079 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 GPBP1Q86WP2 473 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 DAW1Q8N136 415 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 PDILTQ8N807 584 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 DEPTORQ8TB45 409 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 LEO1Q8WVC0 666 aaPredicted RBP19.88■□□□□ 0.77
SNX4-204ENST00000473417 LARP4BQ92615 738 aaKnown RBP19.88■□□□□ 0.77
SNX4-204ENST00000473417 SPATA32Q96LK8 384 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 FAM193BQ96PV7 902 aaPredicted RBP19.88■□□□□ 0.77
SNX4-204ENST00000473417 RNF39Q9H2S5 420 aa19.88■□□□□ 0.77
SNX4-204ENST00000473417 NXF3Q9H4D5 531 aaKnown RBP19.88■□□□□ 0.77
SNX4-204ENST00000473417 MUC6Q6W4X9 2439 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms