RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 MLH1P40692 756 aa15.01□□□□□ -0.01
CHD3-209ENST00000473376 TRAPPC10P48553 1259 aa15.01□□□□□ -0.01
CHD3-209ENST00000473376 USP41Q3LFD5 358 aa15.01□□□□□ -0.01
CHD3-209ENST00000473376 TMC5Q6UXY8 1006 aa15.01□□□□□ -0.01
CHD3-209ENST00000473376 CATSPER3Q86XQ3 398 aa15.01□□□□□ -0.01
CHD3-209ENST00000473376 C12orf76Q8N812 135 aaPredicted RBP15.01□□□□□ -0.01
CHD3-209ENST00000473376 NECAB1Q8N987 351 aa15.01□□□□□ -0.01
CHD3-209ENST00000473376 ASAP3Q8TDY4 903 aa15.01□□□□□ -0.01
CHD3-209ENST00000473376 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
CHD3-209ENST00000473376 FOXP1Q9H334 677 aaPredicted RBP15.01□□□□□ -0.01
CHD3-209ENST00000473376 ZDHHC7Q9NXF8 308 aa15.01□□□□□ -0.01
CHD3-209ENST00000473376 LIMD1Q9UGP4 676 aa15.01□□□□□ -0.01
CHD3-209ENST00000473376 OR1G1P47890 313 aa15□□□□□ -0.01
CHD3-209ENST00000473376 TDGQ13569 410 aa15□□□□□ -0.01
CHD3-209ENST00000473376 PPP2R5AQ15172 486 aa15□□□□□ -0.01
CHD3-209ENST00000473376 ASTLQ6HA08 431 aaPredicted RBP15□□□□□ -0.01
CHD3-209ENST00000473376 RTL10Q7L3V2 364 aa15□□□□□ -0.01
CHD3-209ENST00000473376 ZBTB8OSQ8IWT0 167 aa15□□□□□ -0.01
CHD3-209ENST00000473376 POLR3FQ9H1D9 316 aaPredicted RBP15□□□□□ -0.01
CHD3-209ENST00000473376 WDR6Q9NNW5 1121 aaKnown RBP15□□□□□ -0.01
CHD3-209ENST00000473376 EPS15L1Q9UBC2 864 aa15□□□□□ -0.01
CHD3-209ENST00000473376 ADAM28Q9UKQ2 775 aa15□□□□□ -0.01
CHD3-209ENST00000473376 LIMCH1Q9UPQ0 1083 aa15□□□□□ -0.01
CHD3-209ENST00000473376 N4BP3O15049 544 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 ST18O60284 1047 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 LARGE1O95461 756 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 CYP11B2P19099 503 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 SCNN1GP51170 649 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 EFNA5P52803 228 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 VCPP55072 806 aaKnown RBP14.99□□□□□ -0.01
CHD3-209ENST00000473376 HMGN5P82970 282 aaKnown RBP14.99□□□□□ -0.01
CHD3-209ENST00000473376 PDIA5Q14554 519 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 HAUS3Q68CZ6 603 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 PDXDC1Q6P996 788 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 LILRA6Q6PI73 481 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 PIGOQ8TEQ8 1089 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 CPB2Q96IY4 423 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 ZFP42Q96MM3 310 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 MAN1C1Q9NR34 630 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 BMP2KQ9NSY1 1161 aaPredicted RBP14.99□□□□□ -0.01
CHD3-209ENST00000473376 MIOSQ9NXC5 875 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.99□□□□□ -0.01
CHD3-209ENST00000473376 CDH22Q9UJ99 828 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 DUSP12Q9UNI6 340 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 PRG3Q9Y2Y8 225 aaPredicted RBP14.99□□□□□ -0.01
CHD3-209ENST00000473376 HES2Q9Y543 173 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 ZFP37Q9Y6Q3 630 aaPredicted RBP14.99□□□□□ -0.01
CHD3-209ENST00000473376 CACNA1HO95180 2353 aa14.99□□□□□ -0.01
CHD3-209ENST00000473376 PHLPP2Q6ZVD8 1323 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 KMT2EQ8IZD2 1858 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 CCDC195A0A1B0GUA6 201 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 POTEMA6NI47 508 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 SPDYE4A6NLX3 237 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 ACKR2O00590 384 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 ATP2B1P20020 1258 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 NAMPTP43490 491 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 RBM25P49756 843 aaKnown RBP14.98□□□□□ -0.01
CHD3-209ENST00000473376 ELAVL2Q12926 359 aaKnown RBP14.98□□□□□ -0.01
CHD3-209ENST00000473376 TUSC3Q13454 348 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 MAPK6Q16659 721 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 FUT10Q6P4F1 479 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 FBXO18Q8NFZ0 1043 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 ZSCAN31Q96LW9 406 aaPredicted RBP14.98□□□□□ -0.01
CHD3-209ENST00000473376 ADPGKQ9BRR6 497 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 TMEM60Q9H2L4 133 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 NXF3Q9H4D5 531 aaKnown RBP14.98□□□□□ -0.01
CHD3-209ENST00000473376 KCNK12Q9HB15 430 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 WNT16Q9UBV4 365 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 ARID2Q68CP9 1835 aa14.98□□□□□ -0.01
CHD3-209ENST00000473376 SF3B1O75533 1304 aaKnown RBP eCLIP14.97□□□□□ -0.01
CHD3-209ENST00000473376 LRRIQ4A6NIV6 560 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 WNT7AO00755 349 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 JAK2O60674 1132 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 USO1O60763 962 aaKnown RBP14.97□□□□□ -0.01
CHD3-209ENST00000473376 SSBP05455 408 aaKnown RBP eCLIP14.97□□□□□ -0.01
CHD3-209ENST00000473376 POU2F2P09086 479 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 WEE2P0C1S8 567 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 OR52Z1P0C646 297 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 SP100P23497 879 aaPredicted RBP14.97□□□□□ -0.01
CHD3-209ENST00000473376 MCM7P33993 719 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.01
CHD3-209ENST00000473376 TAS1R1Q7RTX1 841 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 APBB1IPQ7Z5R6 666 aaPredicted RBP14.97□□□□□ -0.01
CHD3-209ENST00000473376 KCTD17Q8N5Z5 321 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 C8orf76Q96K31 380 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 NT5C3AQ9H0P0 336 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 SH2B1Q9NRF2 756 aaPredicted RBP14.97□□□□□ -0.01
CHD3-209ENST00000473376 DENND4AQ7Z401 1863 aa14.97□□□□□ -0.01
CHD3-209ENST00000473376 LAD1O00515 517 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 B4GALT5O43286 388 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 MED24O75448 989 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 TADA2AO75478 443 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 NPTXRO95502 500 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 THP07101 528 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 ASGR2P07307 311 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 AKAP5P24588 427 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 HOXA9P31269 272 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 PRPF4BQ13523 1007 aaKnown RBP14.96□□□□□ -0.01
CHD3-209ENST00000473376 HSP90AA2PQ14568 343 aaPredicted RBP14.96□□□□□ -0.01
CHD3-209ENST00000473376 DCAF4L1Q3SXM0 396 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms