RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CEP170P1Q96L14 293 aa10.75□□□□□ -0.69
MCF2L-223ENST00000473345 APOL6Q9BWW8 343 aa10.75□□□□□ -0.69
MCF2L-223ENST00000473345 INO80BQ9C086 356 aaPredicted RBP10.75□□□□□ -0.69
MCF2L-223ENST00000473345 SH3GLB2Q9NR46 395 aa10.75□□□□□ -0.69
MCF2L-223ENST00000473345 ARHGEF3Q9NR81 526 aa10.75□□□□□ -0.69
MCF2L-223ENST00000473345 DDX25Q9UHL0 483 aaKnown RBP10.75□□□□□ -0.69
MCF2L-223ENST00000473345 CNTNAP2Q9UHC6 1331 aa10.75□□□□□ -0.69
MCF2L-223ENST00000473345 EP300Q09472 2414 aaPredicted RBP10.75□□□□□ -0.69
MCF2L-223ENST00000473345 SPDYE4A6NLX3 237 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 ADH1AP07327 375 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 ITGA4P13612 1032 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 ARF4P18085 180 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-223ENST00000473345 CD72P21854 359 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 QARSP47897 775 aaKnown RBP10.74□□□□□ -0.69
MCF2L-223ENST00000473345 PTENP60484 403 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 CDC42EP1Q00587 391 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 CYP4A11Q02928 519 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 CAPSQ13938 189 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 BLOC1S2Q6QNY1 142 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 RSPO2Q6UXX9 243 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-223ENST00000473345 GRASPQ7Z6J2 395 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-223ENST00000473345 POTEDQ86YR6 584 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 C1orf210Q8IVY1 113 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 PJA1Q8NG27 643 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 KCNG4Q8TDN1 519 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 HASPINQ8TF76 798 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 PSPC1Q8WXF1 523 aaKnown RBP10.74□□□□□ -0.69
MCF2L-223ENST00000473345 CLSTN3Q9BQT9 956 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 LXNQ9BS40 222 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 PRKD2Q9BZL6 878 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 CSRNP2Q9H175 543 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 SLC2A4RGQ9NR83 387 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 HCFC1R1Q9NWW0 138 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 DLL3Q9NYJ7 618 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 FRYLO94915 3013 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 ARID2Q68CP9 1835 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 OTOGLQ3ZCN5 2332 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 FANCMQ8IYD8 2048 aa10.74□□□□□ -0.69
MCF2L-223ENST00000473345 WDR87Q6ZQQ6 2873 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 STK25O00506 426 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 PTGESO14684 152 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 GAS2O43903 313 aaKnown RBP10.73□□□□□ -0.69
MCF2L-223ENST00000473345 CDC45O75419 566 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 ZMYND10O75800 440 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 HMGB1P09429 215 aaKnown RBP10.73□□□□□ -0.69
MCF2L-223ENST00000473345 TGM1P22735 817 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 GLRA2P23416 452 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 YWHABP31946 246 aaKnown RBP10.73□□□□□ -0.69
MCF2L-223ENST00000473345 STARD6P59095 220 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 FGD1P98174 961 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 FZD5Q13467 585 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 SNW1Q13573 536 aaKnown RBP10.73□□□□□ -0.69
MCF2L-223ENST00000473345 NAB2Q15742 525 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 DCLRE1AQ6PJP8 1040 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 MOXD1Q6UVY6 613 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 CD300LGQ6UXG3 332 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 IFNLR1Q8IU57 520 aaPredicted RBP10.73□□□□□ -0.69
MCF2L-223ENST00000473345 C4orf19Q8IY42 314 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 RSPH1Q8WYR4 309 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 FAM193BQ96PV7 902 aaPredicted RBP10.73□□□□□ -0.69
MCF2L-223ENST00000473345 DDX23Q9BUQ8 820 aaKnown RBP10.73□□□□□ -0.69
MCF2L-223ENST00000473345 PLA2G2FQ9BZM2 168 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 KANSL3Q9P2N6 904 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 SIT1Q9Y3P8 196 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 NOTCH4Q99466 2003 aa10.73□□□□□ -0.69
MCF2L-223ENST00000473345 NCOR2Q9Y618 2525 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 SLITRK3O94933 977 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 KIF4AO95239 1232 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 NPTXRO95502 500 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 P4HBP07237 508 aaKnown RBP10.72□□□□□ -0.69
MCF2L-223ENST00000473345 HOXC13P31276 330 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 ARL2P36404 184 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 AKAP17AQ02040 695 aaKnown RBP10.72□□□□□ -0.69
MCF2L-223ENST00000473345 STK3Q13188 491 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 NONOQ15233 471 aaKnown RBP eCLIP10.72□□□□□ -0.69
MCF2L-223ENST00000473345 EPHA7Q15375 998 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 TSSK4Q6SA08 328 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 DGLUCYQ7Z3D6 616 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 LNX1Q8TBB1 728 aaPredicted RBP10.72□□□□□ -0.69
MCF2L-223ENST00000473345 SLC7A3Q8WY07 619 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 CNTNAP3BQ96NU0 1288 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 KXD1Q9BQD3 176 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 PHF20Q9BVI0 1012 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 CNTNAP3Q9BZ76 1288 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 GPRC5CQ9NQ84 441 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 FNIP2Q9P278 1114 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 FBXW11Q9UKB1 542 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 ADAM28Q9UKQ2 775 aa10.72□□□□□ -0.69
MCF2L-223ENST00000473345 NCANO14594 1321 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 CCL16O15467 120 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 CTDNEP1O95476 244 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 FSHRP23945 695 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 TARSP26639 723 aaKnown RBP10.71□□□□□ -0.69
MCF2L-223ENST00000473345 RFC5P40937 340 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 SSRP1Q08945 709 aaKnown RBP10.71□□□□□ -0.69
MCF2L-223ENST00000473345 RSPO4Q2I0M5 234 aaPredicted RBP10.71□□□□□ -0.69
MCF2L-223ENST00000473345 SLC5A9Q2M3M2 681 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 XKR9Q5GH70 373 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 NCAPH2Q6IBW4 605 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 CYP26C1Q6V0L0 522 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms