RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 KPNA1P52294 538 aaPredicted RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 NR1H2P55055 460 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 RNASE9P60153 205 aaKnown RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 CALD1Q05682 793 aaKnown RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 DMTNQ08495 405 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 CUL4AQ13619 759 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 TAF7Q15545 349 aaPredicted RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 MMEL1Q495T6 779 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 ODF2Q5BJF6 829 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 BTNL9Q6UXG8 535 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 USP51Q70EK9 711 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 SLC9B2Q86UD5 537 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 CCNJLQ8IV13 435 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 KIAA0319LQ8IZA0 1049 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 ATG16L2Q8NAA4 619 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 GOT1L1Q8NHS2 421 aaPredicted RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 GABPB2Q8TAK5 448 aaPredicted RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 BICD2Q8TD16 824 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 LRTOMTQ8WZ04 291 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 SLC5A5Q92911 643 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 PTPRN2Q92932 1015 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 SLC9A7Q96T83 725 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 C7orf25Q9BPX7 421 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 FSD1Q9BTV5 496 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 TRPV4Q9HBA0 871 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 FANCFQ9NPI8 374 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 PIM2Q9P1W9 311 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 CTNNA3Q9UI47 895 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 SH3BGRL2Q9UJC5 107 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 ZNF214Q9UL59 606 aaPredicted RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 L1RE1Q9UN81 338 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 SIK3Q9Y2K2 1263 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 PCDHGB5Q9Y5G0 923 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 ZNF644Q9H582 1327 aaPredicted RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 CCDC69A6NI79 296 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 H3BML4 177 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 HOXC11O43248 304 aaPredicted RBP6.63□□□□□ -1.35
RTF1-203ENST00000473214 B3GALT2O43825 422 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 SOAT2O75908 522 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 UBXN7O94888 489 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 FSBPO95073 299 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 PAPLNO95428 1278 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 CYP17A1P05093 508 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 ATP5F1P24539 256 aaPredicted RBP6.63□□□□□ -1.35
RTF1-203ENST00000473214 ATP5DP30049 168 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 HADHAP40939 763 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 GRIA4P48058 902 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 FXR1P51114 621 aaKnown RBP eCLIP6.63□□□□□ -1.35
RTF1-203ENST00000473214 CABP4P57796 275 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 LRRC74AQ0VAA2 488 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 BECN1Q14457 450 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 RASA2Q15283 850 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 LRCH2Q5VUJ6 765 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 INTS3Q68E01 1043 aaKnown RBP6.63□□□□□ -1.35
RTF1-203ENST00000473214 GPR139Q6DWJ6 353 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 FDX2Q6P4F2 183 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 NLRC3Q7RTR2 1065 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 KRT74Q7RTS7 529 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 CREG2Q8IUH2 290 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 TRMT2AQ8IZ69 625 aaKnown RBP6.63□□□□□ -1.35
RTF1-203ENST00000473214 NUP93Q8N1F7 819 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 THEMISQ8N1K5 641 aaPredicted RBP6.63□□□□□ -1.35
RTF1-203ENST00000473214 TOR1AIP2Q8NFQ8 470 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 UTP15Q8TED0 518 aaKnown RBP6.63□□□□□ -1.35
RTF1-203ENST00000473214 ITFG2Q969R8 447 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 ATG4CQ96DT6 458 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 YME1L1Q96TA2 773 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 SCAF11Q99590 1463 aaKnown RBP6.63□□□□□ -1.35
RTF1-203ENST00000473214 ARHGAP39Q9C0H5 1083 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 GMIPQ9P107 970 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 JCADQ9P266 1359 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 PCSK1NQ9UHG2 260 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 DUSP12Q9UNI6 340 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 CYP8B1Q9UNU6 501 aa6.63□□□□□ -1.35
RTF1-203ENST00000473214 C19orf53Q9UNZ5 99 aaPredicted RBP6.63□□□□□ -1.35
RTF1-203ENST00000473214 ZFP37Q9Y6Q3 630 aaPredicted RBP6.63□□□□□ -1.35
RTF1-203ENST00000473214 TIAM1Q13009 1591 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 ARHGAP23Q9P227 1491 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 FMN1Q68DA7 1419 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 DAPK3O43293 454 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 DGKIO75912 1065 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 GOSR1O95249 250 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 CRTAMO95727 393 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 C8AP07357 584 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 ZBTB48P10074 688 aaPredicted RBP6.62□□□□□ -1.35
RTF1-203ENST00000473214 EEF2P13639 858 aaKnown RBP6.62□□□□□ -1.35
RTF1-203ENST00000473214 MAP4P27816 1152 aaKnown RBP6.62□□□□□ -1.35
RTF1-203ENST00000473214 MC4RP32245 332 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 ZNF157P51786 506 aaPredicted RBP6.62□□□□□ -1.35
RTF1-203ENST00000473214 CLCN2P51788 898 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 NLRP12P59046 1061 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 PPARDQ03181 441 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 PDE4BQ07343 736 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 FAAP100Q0VG06 881 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 CNN3Q15417 329 aaKnown RBP6.62□□□□□ -1.35
RTF1-203ENST00000473214 MSMPQ1L6U9 139 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 ZNF423Q2M1K9 1284 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 SPRED3Q2MJR0 410 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 MUM1Q2TAK8 710 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 C5orf22Q49AR2 442 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms