RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 PPM1MQ96MI6 270 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 TUBGCP5Q96RT8 1024 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 JMJD8Q96S16 334 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 MYOCQ99972 504 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 DESI2Q9BSY9 194 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 STK31Q9BXU1 1019 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 ACE2Q9BYF1 805 aaPredicted RBP3.13□□□□□ -1.91
XRN1-210ENST00000472697 AGXT2Q9BYV1 514 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 ATP13A1Q9HD20 1204 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 ZCCHC17Q9NP64 241 aaKnown RBP3.13□□□□□ -1.91
XRN1-210ENST00000472697 SLC39A2Q9NP94 309 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 TBC1D23Q9NUY8 699 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 KIF17Q9P2E2 1029 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 AASSQ9UDR5 926 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 RUVBL1Q9Y265 456 aaKnown RBP3.13□□□□□ -1.91
XRN1-210ENST00000472697 CAPN6Q9Y6Q1 641 aa3.13□□□□□ -1.91
XRN1-210ENST00000472697 PRAMEF22A3QJZ6 481 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 AREL1O15033 823 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 PFKMP08237 780 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 FGFR2P21802 821 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 EEF1GP26641 437 aaKnown RBP3.12□□□□□ -1.91
XRN1-210ENST00000472697 CACNB3P54284 484 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 BCAR1P56945 870 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 ANTXR2P58335 489 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 NRG1Q02297 640 aaPredicted RBP3.12□□□□□ -1.91
XRN1-210ENST00000472697 NOGQ13253 232 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 KRT32Q14532 448 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 POLD3Q15054 466 aaPredicted RBP3.12□□□□□ -1.91
XRN1-210ENST00000472697 PRAMEF18Q5VWM3 479 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 ABHD15Q6UXT9 468 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 RRAGAQ7L523 313 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 WFDC3Q8IUB2 231 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 TXLNBQ8N3L3 684 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 DCBLD1Q8N8Z6 715 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 SCAMP5Q8TAC9 235 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 HSPA12BQ96MM6 686 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 MMP19Q99542 508 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 PDCD2LQ9BRP1 358 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 NUP62CLQ9H1M0 184 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 BTBD7Q9P203 1132 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 FEM1BQ9UK73 627 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 SLC39A10Q9ULF5 831 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 AFG3L2Q9Y4W6 797 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 PRG4Q92954 1404 aaPredicted RBP3.12□□□□□ -1.91
XRN1-210ENST00000472697 TTC37Q6PGP7 1564 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 CCDC88BA6NC98 1476 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 RAD54L2Q9Y4B4 1467 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 A0A0A6YYK5 440 aaPredicted RBP3.12□□□□□ -1.91
XRN1-210ENST00000472697 HMX2A2RU54 273 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 HMX3A6NHT5 357 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 GOLGA6L22H0YM25 854 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 AMY1AP04745 511 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 IL1R1P14778 569 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 PTMSP20962 102 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 PCSK1P29120 753 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 ETV3P41162 512 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 USP11P51784 963 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 DLGAP5Q15398 846 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 CNGA2Q16280 664 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 KHDC1Q4VXA5 237 aaKnown RBP3.12□□□□□ -1.91
XRN1-210ENST00000472697 PAN2Q504Q3 1202 aaKnown RBP3.12□□□□□ -1.91
XRN1-210ENST00000472697 DGKKQ5KSL6 1271 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 INTS11Q5TA45 600 aaKnown RBP3.12□□□□□ -1.91
XRN1-210ENST00000472697 HEATR3Q7Z4Q2 680 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 ADAMTS18Q8TE60 1221 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 IPCEF1Q8WWN9 437 aaPredicted RBP3.12□□□□□ -1.91
XRN1-210ENST00000472697 AUTS2Q8WXX7 1259 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 UBE2FQ969M7 185 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 ZUFSPQ96AP4 578 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 RMDN3Q96TC7 470 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 SOX7Q9BT81 388 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 FAM167BQ9BTA0 163 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 AMNQ9BXJ7 453 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 SLAMF7Q9NQ25 335 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 LPAR3Q9UBY5 353 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 FBXO2Q9UK22 296 aaPredicted RBP3.12□□□□□ -1.91
XRN1-210ENST00000472697 FBXO10Q9UK96 956 aa3.12□□□□□ -1.91
XRN1-210ENST00000472697 RIMS1Q86UR5 1692 aaKnown RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 B4E171 279 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 F8W735 103 aaPredicted RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 ADAMTS3O15072 1205 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 PLA2G6O60733 806 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 IL18RAPO95256 599 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 TUBB4AP04350 444 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 CYP21A2P08686 494 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 AKR1B1P15121 316 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 TSPAN7P41732 249 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 CASP2P42575 452 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 RAD52P43351 418 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 CCT5P48643 541 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 CTCFP49711 727 aaPredicted RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 CCT4P50991 539 aaKnown RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 NKX6-1P78426 367 aaPredicted RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 BLMHQ13867 455 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 SPARCL1Q14515 664 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 NR0B2Q15466 257 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 MEA1Q16626 185 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 FAM110CQ1W6H9 321 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 SFRP5Q5T4F7 317 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 IQCEQ6IPM2 695 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms