RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SLC44A5Q8NCS7 719 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 CHST13Q8NET6 341 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 ACER1Q8TDN7 264 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 ATXN2LQ8WWM7 1075 aaKnown RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 BADQ92934 168 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 TIFAQ96CG3 184 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 EAF2Q96CJ1 260 aaPredicted RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 DDX11Q96FC9 970 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 SEC16BQ96JE7 1060 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 FERD3LQ96RJ6 166 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 DNAJC2Q99543 621 aaKnown RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 CDX2Q99626 313 aaPredicted RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 SLF1Q9BQI6 1058 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 MCMBPQ9BTE3 642 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 SRRTQ9BXP5 876 aaKnown RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 NACAP1Q9BZK3 213 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 FOXP3Q9BZS1 431 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 CCDC8Q9H0W5 538 aaPredicted RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 ABHD16BQ9H3Z7 469 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 GPATCH2Q9NW75 528 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 PAG1Q9NWQ8 432 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 GFOD1Q9NXC2 390 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 PRR13Q9NZ81 148 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 FLRT1Q9NZU1 646 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 FAM184BQ9ULE4 1060 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 PCDHB10Q9UN67 800 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 ZNF451Q9Y4E5 1061 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 FOCADQ5VW36 1801 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 RAD50Q92878 1312 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 ZNF532Q9HCE3 1301 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 SIPA1L1O43166 1804 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 NAV1Q8NEY1 1877 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ASB14A6NK59 587 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 B4DLN1 442 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ETV2O00321 342 aaPredicted RBP4.14□□□□□ -1.75
XRN1-209ENST00000472625 VWA5AO00534 786 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 NFIBO00712 420 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 PSPNO60542 156 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 BCAR3O75815 825 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ZNF205O95201 554 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 MBD4O95243 580 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 TTLL1O95922 423 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 TIMP1P01033 207 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ATP5JP18859 108 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ADD2P35612 726 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 MRPL12P52815 198 aaKnown RBP4.14□□□□□ -1.75
XRN1-209ENST00000472625 ACLYP53396 1101 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ZNF445P59923 1031 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 TLE2Q04725 743 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 CYP4F3Q08477 520 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 KIR3DS1Q14943 382 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 TMEM132BQ14DG7 1078 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 SHHQ15465 462 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 NR0B2Q15466 257 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 TKFCQ3LXA3 575 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 AKNAD1Q5T1N1 836 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 C12orf60Q5U649 245 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 SNRNP48Q6IEG0 339 aaKnown RBP4.14□□□□□ -1.75
XRN1-209ENST00000472625 MFSD5Q6N075 450 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 CRTC3Q6UUV7 619 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 MAMDC4Q6UXC1 1216 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ATG14Q6ZNE5 492 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 SIRT2Q8IXJ6 389 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 SPICE1Q8N0Z3 855 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ANKRD35Q8N283 1001 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 LCORLQ8N3X6 602 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ZNF655Q8N720 491 aaPredicted RBP4.14□□□□□ -1.75
XRN1-209ENST00000472625 TRPV1Q8NER1 839 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 NPLOC4Q8TAT6 608 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 SDR42E1Q8WUS8 393 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 CCDC120Q96HB5 630 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 SPATA32Q96LK8 384 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 PPP1R16BQ96T49 567 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 HAUS7Q99871 368 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 KLHL25Q9H0H3 589 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 BCL11AQ9H165 835 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ACAD9Q9H845 621 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 GP6Q9HCN6 339 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ERVK13-1Q9NX77 482 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 THEGQ9P2T0 379 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 MSRAQ9UJ68 235 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 FEM1BQ9UK73 627 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 ZHX1Q9UKY1 873 aaPredicted RBP4.14□□□□□ -1.75
XRN1-209ENST00000472625 ADAMTS5Q9UNA0 930 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 EXOC6BQ9Y2D4 811 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 SLC4A4Q9Y6R1 1079 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 SYNRGQ9UMZ2 1314 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 PLIN4Q96Q06 1357 aa4.14□□□□□ -1.75
XRN1-209ENST00000472625 A0A1W2PRG0 241 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 TCRBV5S4A2TA0A5A2 114 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 CAPNS1P04632 268 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 C6orf222P0C671 652 aaPredicted RBP4.13□□□□□ -1.75
XRN1-209ENST00000472625 SUPT20HL2P0C7V6 817 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 ZSCAN22P10073 491 aaPredicted RBP4.13□□□□□ -1.75
XRN1-209ENST00000472625 ACTN1P12814 892 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 EEF2P13639 858 aaKnown RBP4.13□□□□□ -1.75
XRN1-209ENST00000472625 AKR1B1P15121 316 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 CD247P20963 164 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms