RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 FAM13AO94988 1023 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 ALDH2P05091 517 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 GALTP07902 379 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 GUCY2CP25092 1073 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 SLC12A3P55017 1021 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 SMC1AQ14683 1233 aaKnown RBP16.29■□□□□ 0.2
SSR4-208ENST00000471880 PTPAQ15257 358 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 FAM187BQ17R55 369 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 LEXMQ3ZCV2 418 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 EEF1DP3Q658K8 133 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 PDE12Q6L8Q7 609 aaKnown RBP16.29■□□□□ 0.2
SSR4-208ENST00000471880 APBB1IPQ7Z5R6 666 aaPredicted RBP16.29■□□□□ 0.2
SSR4-208ENST00000471880 ZBTB33Q86T24 672 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 TMEM173Q86WV6 379 aaPredicted RBP16.29■□□□□ 0.2
SSR4-208ENST00000471880 DAW1Q8N136 415 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 VPS52Q8N1B4 723 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 AUTS2Q8WXX7 1259 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 BICD1Q96G01 975 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 IGSF21Q96ID5 467 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 EPSTI1Q96J88 318 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 NGRNQ9NPE2 291 aaKnown RBP16.29■□□□□ 0.2
SSR4-208ENST00000471880 TFIP11Q9UBB9 837 aaKnown RBP16.29■□□□□ 0.2
SSR4-208ENST00000471880 GIT1Q9Y2X7 761 aa16.29■□□□□ 0.2
SSR4-208ENST00000471880 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.28■□□□□ 0.2
SSR4-208ENST00000471880 CARNS1A5YM72 827 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 SLC26A4O43511 780 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 B4GALT3O60512 393 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 TBCAO75347 108 aaKnown RBP16.28■□□□□ 0.2
SSR4-208ENST00000471880 CXCL14O95715 111 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 EDN1P05305 212 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 SRGAP2BP0DMP2 458 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 LTBRP36941 435 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 OSTNP61366 133 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 DLX2Q07687 328 aaPredicted RBP16.28■□□□□ 0.2
SSR4-208ENST00000471880 MAPK7Q13164 816 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 DCAF4L1Q3SXM0 396 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 ZNF568Q3ZCX4 644 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 KCTD17Q8N5Z5 321 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.28■□□□□ 0.2
SSR4-208ENST00000471880 RAD54LQ92698 747 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 MRPL4Q9BYD3 311 aaKnown RBP16.28■□□□□ 0.2
SSR4-208ENST00000471880 PANK2Q9BZ23 570 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 FBXO2Q9UK22 296 aaPredicted RBP16.28■□□□□ 0.2
SSR4-208ENST00000471880 BARX2Q9UMQ3 279 aaPredicted RBP16.28■□□□□ 0.2
SSR4-208ENST00000471880 FAM50BQ9Y247 325 aa16.28■□□□□ 0.2
SSR4-208ENST00000471880 SPDYE4A6NLX3 237 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 HIDE1A8MVS5 230 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 C2CD2LO14523 706 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 NRP1O14786 923 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 TBX10O75333 385 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 RECQL4O94761 1208 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 PLS3P13797 630 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 IL9P15248 144 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 SSTR3P32745 418 aaPredicted RBP16.27■□□□□ 0.2
SSR4-208ENST00000471880 NT5DC1Q5TFE4 455 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 RRAGBQ5VZM2 374 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 USP49Q70CQ1 688 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 MYCT1Q8N699 235 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 EFHBQ8N7U6 833 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
SSR4-208ENST00000471880 BCL7CQ8WUZ0 217 aaPredicted RBP16.27■□□□□ 0.2
SSR4-208ENST00000471880 LARP4BQ92615 738 aaKnown RBP16.27■□□□□ 0.2
SSR4-208ENST00000471880 RABGGTAQ92696 567 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 REEP2Q9BRK0 252 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 TMEM175Q9BSA9 504 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 TARS2Q9BW92 718 aaKnown RBP16.27■□□□□ 0.2
SSR4-208ENST00000471880 C17orf75Q9HAS0 396 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 MIOSQ9NXC5 875 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 KCND2Q9NZV8 630 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 LARSQ9P2J5 1176 aaKnown RBP16.27■□□□□ 0.2
SSR4-208ENST00000471880 ANKFY1Q9P2R3 1169 aa16.27■□□□□ 0.2
SSR4-208ENST00000471880 RBM19Q9Y4C8 960 aaKnown RBP16.27■□□□□ 0.2
SSR4-208ENST00000471880 SRPRBQ9Y5M8 271 aaKnown RBP16.27■□□□□ 0.2
SSR4-208ENST00000471880 K7ENM7 598 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 TNFRSF10AO00220 468 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 FSCN2O14926 492 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 ZSCAN22P10073 491 aaPredicted RBP16.26■□□□□ 0.19
SSR4-208ENST00000471880 RBM10P98175 930 aaKnown RBP16.26■□□□□ 0.19
SSR4-208ENST00000471880 ADAM15Q13444 863 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 DUSP6Q16828 381 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 CTC1Q2NKJ3 1217 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 APOL5Q9BWW9 433 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 CCSER1Q9C0I3 900 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 TMEM134Q9H6X4 195 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 CD320Q9NPF0 282 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 BLOC1S4Q9NUP1 217 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 KCNG1Q9UIX4 513 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 CD207Q9UJ71 328 aa16.26■□□□□ 0.19
SSR4-208ENST00000471880 MYH15Q9Y2K3 1946 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 CASTOR2A6NHX0 329 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 TULP1O00294 542 aaPredicted RBP16.25■□□□□ 0.19
SSR4-208ENST00000471880 STAT6P42226 847 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 YARSP54577 528 aaKnown RBP16.25■□□□□ 0.19
SSR4-208ENST00000471880 GRIK3Q13003 919 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 SLC39A14Q15043 492 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 PUS10Q3MIT2 529 aaKnown RBP16.25■□□□□ 0.19
SSR4-208ENST00000471880 ARSHQ5FYA8 562 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 GLRA4Q5JXX5 417 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 KIAA1841Q6NSI8 718 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 DYMQ7RTS9 669 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms