RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 INPPL1O15357 1258 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 DGAT1O75907 488 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 HOXB8P17481 243 aaPredicted RBP8.96□□□□□ -0.98
USP48-207ENST00000471752 KLRC2P26717 231 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 RAB27AP51159 221 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 TCF15Q12870 199 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 NAB2Q15742 525 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 PTPN21Q16825 1174 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 TTC38Q5R3I4 469 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 PRSS55Q6UWB4 352 aaPredicted RBP8.96□□□□□ -0.98
USP48-207ENST00000471752 FAM43BQ6ZT52 329 aaPredicted RBP8.96□□□□□ -0.98
USP48-207ENST00000471752 TAS1R3Q7RTX0 852 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 RNF168Q8IYW5 571 aaPredicted RBP8.96□□□□□ -0.98
USP48-207ENST00000471752 LRRC15Q8TF66 581 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 HASPINQ8TF76 798 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 TCP11Q8WWU5 503 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 CASP10Q92851 521 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 PGBD4Q96DM1 585 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 NAP1L4Q99733 375 aaKnown RBP8.96□□□□□ -0.98
USP48-207ENST00000471752 MMTAG2Q9BU76 263 aaKnown RBP8.96□□□□□ -0.98
USP48-207ENST00000471752 POLR3CQ9BUI4 534 aaPredicted RBP8.96□□□□□ -0.98
USP48-207ENST00000471752 PDZD7Q9H5P4 517 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 BRMS1Q9HCU9 246 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 FAM86C1Q9NVL1 165 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 PARP2Q9UGN5 583 aa8.96□□□□□ -0.98
USP48-207ENST00000471752 CASTOR2A6NHX0 329 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 SFI1A8K8P3 1242 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 PI15O43692 258 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 NARSO43776 548 aaKnown RBP8.95□□□□□ -0.98
USP48-207ENST00000471752 DKC1O60832 514 aaKnown RBP eCLIP8.95□□□□□ -0.98
USP48-207ENST00000471752 ERLIN2O94905 339 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 SOD2P04179 222 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 OR52Z1P0C646 297 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 SKIP12755 728 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 CYP11B2P19099 503 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 POU5F1BQ06416 359 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 PTGDRQ13258 359 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 TRIM29Q14134 588 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 MXD4Q14582 209 aaPredicted RBP8.95□□□□□ -0.98
USP48-207ENST00000471752 RTP2Q5QGT7 225 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 ERICH6BQ5W0A0 696 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 CDCA2Q69YH5 1023 aaPredicted RBP8.95□□□□□ -0.98
USP48-207ENST00000471752 NOTUMQ6P988 496 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 RSPO2Q6UXX9 243 aaPredicted RBP8.95□□□□□ -0.98
USP48-207ENST00000471752 GPR149Q86SP6 731 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 DAW1Q8N136 415 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 CEP120Q8N960 986 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 URGCPQ8TCY9 931 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 ZNF707Q96C28 371 aaPredicted RBP8.95□□□□□ -0.98
USP48-207ENST00000471752 MS4A3Q96HJ5 214 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 RPS6KC1Q96S38 1066 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 PLIN2Q99541 437 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 CCDC113Q9H0I3 377 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 CHST7Q9NS84 486 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 DBR1Q9UK59 544 aaKnown RBP8.95□□□□□ -0.98
USP48-207ENST00000471752 KIAA1024Q9UPX6 916 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 PPME1Q9Y570 386 aa8.95□□□□□ -0.98
USP48-207ENST00000471752 PTPRZ1P23471 2315 aaPredicted RBP8.94□□□□□ -0.98
USP48-207ENST00000471752 NPHP3-ACAD11A0A0J9YXS1 232 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 I3L4J1 428 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 NRG2O14511 850 aaPredicted RBP8.94□□□□□ -0.98
USP48-207ENST00000471752 XRCC6P12956 609 aaKnown RBP eCLIP8.94□□□□□ -0.98
USP48-207ENST00000471752 U2AF2P26368 475 aaKnown RBP eCLIP8.94□□□□□ -0.98
USP48-207ENST00000471752 RPA1P27694 616 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 AVPR2P30518 371 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 CCT6AP40227 531 aaKnown RBP8.94□□□□□ -0.98
USP48-207ENST00000471752 NTHL1P78549 312 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 SOX4Q06945 474 aaPredicted RBP8.94□□□□□ -0.98
USP48-207ENST00000471752 SIGLEC14Q08ET2 396 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 RAD51AP2Q09MP3 1159 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 TFDP1Q14186 410 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 TPRNQ4KMQ1 711 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 ATAT1Q5SQI0 421 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 SLC27A1Q6PCB7 646 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 LILRA6Q6PI73 481 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 BMP8AQ7Z5Y6 402 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 CABP7Q86V35 215 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 EXOC8Q8IYI6 725 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 FBXL6Q8N531 539 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 ZBTB45Q96K62 511 aaPredicted RBP8.94□□□□□ -0.98
USP48-207ENST00000471752 PNMA5Q96PV4 448 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 FAM193BQ96PV7 902 aaPredicted RBP8.94□□□□□ -0.98
USP48-207ENST00000471752 NACC1Q96RE7 527 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 MYADMQ96S97 322 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 TMEM175Q9BSA9 504 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 RPP25Q9BUL9 199 aaKnown RBP8.94□□□□□ -0.98
USP48-207ENST00000471752 RUSC1Q9BVN2 902 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 HERC2P3Q9BVR0 1158 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 BHMT2Q9H2M3 363 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 FOXP1Q9H334 677 aaPredicted RBP8.94□□□□□ -0.98
USP48-207ENST00000471752 GOLGA2P5Q9HBQ8 144 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 RXFP1Q9HBX9 757 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 TUFT1Q9NNX1 390 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 MAN1C1Q9NR34 630 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 DDX19AQ9NUU7 478 aaKnown RBP8.94□□□□□ -0.98
USP48-207ENST00000471752 GDAQ9Y2T3 454 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 ARIH1Q9Y4X5 557 aaPredicted RBP8.94□□□□□ -0.98
USP48-207ENST00000471752 CNTNAP2Q9UHC6 1331 aa8.94□□□□□ -0.98
USP48-207ENST00000471752 CCDC195A0A1B0GUA6 201 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 TGM5O43548 720 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms