RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TGM1P22735 817 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 AKAP5P24588 427 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 CHMLP26374 656 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 FNTBP49356 437 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 JAK3P52333 1124 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 CREMQ03060 361 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 ADCY1Q08828 1119 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 NCBP1Q09161 790 aaKnown RBP7.69□□□□□ -1.18
HDAC1-204ENST00000471488 ACAP1Q15027 740 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 SF3A2Q15428 464 aaKnown RBP7.69□□□□□ -1.18
HDAC1-204ENST00000471488 TMEM132AQ24JP5 1023 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 PABPC1LQ4VXU2 614 aaKnown RBP7.69□□□□□ -1.18
HDAC1-204ENST00000471488 XKR3Q5GH77 459 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 EXOC6Q8TAG9 804 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 HDAC7Q8WUI4 952 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 NELL2Q99435 816 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 EIF2AQ9BY44 585 aaKnown RBP7.69□□□□□ -1.18
HDAC1-204ENST00000471488 RNF39Q9H2S5 420 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 BRD9Q9H8M2 597 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 LMAN1LQ9HAT1 526 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 UBN1Q9NPG3 1134 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.69□□□□□ -1.18
HDAC1-204ENST00000471488 MIOSQ9NXC5 875 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 ADAM28Q9UKQ2 775 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 MRPS23Q9Y3D9 190 aaKnown RBP7.69□□□□□ -1.18
HDAC1-204ENST00000471488 IPPQ9Y573 584 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 COL4A3BPQ9Y5P4 624 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 PATJQ8NI35 1801 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 CHD8Q9HCK8 2581 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 KLF18A0A0U1RQI7 1052 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 CASTOR2A6NHX0 329 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 hCG_1984214I3L0E3 225 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 INO80B-WBP1J3KQ70 363 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 CYP3A4P08684 503 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 SFNP31947 248 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 LIFRP42702 1097 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 CLK2P49760 499 aaKnown RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 NPEPPSP55786 919 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 AKAP17AQ02040 695 aaKnown RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 FOXC1Q12948 553 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 PSMD5Q16401 504 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 RTP2Q5QGT7 225 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 UBXN11Q5T124 520 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 TTC22Q5TAA0 569 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 FAM171A1Q5VUB5 890 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 APOA5Q6Q788 366 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 CDR2LQ86X02 465 aaPredicted RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 SMC5Q8IY18 1101 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 HACE1Q8IYU2 909 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 CELF5Q8N6W0 485 aaKnown RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 ZNF713Q8N859 430 aaPredicted RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 RNF149Q8NC42 400 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 SMG8Q8ND04 991 aaKnown RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 PRPF31Q8WWY3 499 aaKnown RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 PSPC1Q8WXF1 523 aaKnown RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 SLC7A3Q8WY07 619 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 DDX1Q92499 740 aaKnown RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 BORCS6Q96GS4 357 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 CEP170P1Q96L14 293 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 DDX23Q9BUQ8 820 aaKnown RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 TRAIPQ9BWF2 469 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 FAM126AQ9BYI3 521 aaPredicted RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 OSBPL6Q9BZF3 934 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 PLA2G2FQ9BZM2 168 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 MINDY3Q9H8M7 445 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 RXFP1Q9HBX9 757 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 PRMT8Q9NR22 394 aaPredicted RBP7.68□□□□□ -1.18
HDAC1-204ENST00000471488 ZMIZ1Q9ULJ6 1067 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 BAHCC1Q9P281 2608 aa7.68□□□□□ -1.18
HDAC1-204ENST00000471488 DOCK8Q8NF50 2099 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 C1QTNF9BB2RNN3 333 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 SLC27A2O14975 620 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 SGSM2O43147 1006 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 MARCH6O60337 910 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 MAFO75444 373 aaPredicted RBP7.67□□□□□ -1.18
HDAC1-204ENST00000471488 NPTXRO95502 500 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 C1QTNF9P0C862 333 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 SPINK2P20155 84 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 GNA11P29992 359 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 RPS9P46781 194 aaKnown RBP7.67□□□□□ -1.18
HDAC1-204ENST00000471488 CXCL12P48061 93 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 CCR3P51677 355 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 ARPP19P56211 112 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 SATB1Q01826 763 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 LAMTOR4Q0VGL1 99 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 HSP90AA2PQ14568 343 aaPredicted RBP7.67□□□□□ -1.18
HDAC1-204ENST00000471488 CSRP2Q16527 193 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 AXDND1Q5T1B0 1012 aaPredicted RBP7.67□□□□□ -1.18
HDAC1-204ENST00000471488 TANGO2Q6ICL3 276 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 PSAPL1Q6NUJ1 521 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 NOTUMQ6P988 496 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 RSPO2Q6UXX9 243 aaPredicted RBP7.67□□□□□ -1.18
HDAC1-204ENST00000471488 SRGAP1Q7Z6B7 1085 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 MRPL10Q7Z7H8 261 aaKnown RBP7.67□□□□□ -1.18
HDAC1-204ENST00000471488 NPAS3Q8IXF0 933 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 CNNM3Q8NE01 707 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 TTC8Q8TAM2 541 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 FAM200AQ8TCP9 573 aa7.67□□□□□ -1.18
HDAC1-204ENST00000471488 CCDC12Q8WUD4 166 aaPredicted RBP7.67□□□□□ -1.18
HDAC1-204ENST00000471488 FAM3CQ92520 227 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms