RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 POU2F2P09086 479 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 KIF23Q02241 960 aaPredicted RBP7.13□□□□□ -1.27
CKS1B-204ENST00000471245 PPARAQ07869 468 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 NOLC1Q14978 699 aaKnown RBP eCLIP7.13□□□□□ -1.27
CKS1B-204ENST00000471245 SKIDA1Q1XH10 827 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 ARHGAP29Q52LW3 1261 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 LILRA6Q6PI73 481 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 LRSAM1Q6UWE0 723 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 KSR2Q6VAB6 950 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 PRR23BQ6ZRT6 265 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 BMP8AQ7Z5Y6 402 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 FBXO15Q8NCQ5 510 aaPredicted RBP7.13□□□□□ -1.27
CKS1B-204ENST00000471245 PMM1Q92871 262 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 HPS3Q969F9 1004 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 FAM84AQ96KN4 292 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 PSMD1Q99460 953 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 SARGQ9BW04 601 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 ACE2Q9BYF1 805 aaPredicted RBP7.13□□□□□ -1.27
CKS1B-204ENST00000471245 HAPLN2Q9GZV7 340 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 EPB41L4BQ9H329 900 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 RBPJLQ9UBG7 517 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 PLA2G2DQ9UNK4 145 aa7.13□□□□□ -1.27
CKS1B-204ENST00000471245 ADGRB2O60241 1585 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 CCDC144AA2RUR9 1427 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 NAIPQ13075 1403 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 ROCK1Q13464 1354 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 TPD52L2O43399 206 aaKnown RBP7.12□□□□□ -1.27
CKS1B-204ENST00000471245 AP1G1O43747 822 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 CUTAO60888 179 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 DTNBO60941 627 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 FARP2O94887 1054 aaPredicted RBP7.12□□□□□ -1.27
CKS1B-204ENST00000471245 CELA3BP08861 270 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 CYP2C8P10632 490 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 MESP2Q0VG99 397 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 GRM3Q14832 879 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 TARBP2Q15633 366 aaKnown RBP7.12□□□□□ -1.27
CKS1B-204ENST00000471245 MLANAQ16655 118 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 KANK2Q63ZY3 851 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 TMC5Q6UXY8 1006 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 CXXC5Q7LFL8 322 aaKnown RBP7.12□□□□□ -1.27
CKS1B-204ENST00000471245 FAM26EQ8N5C1 309 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 SAMD3Q8N6K7 520 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 FATE1Q969F0 183 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 TTC17Q96AE7 1141 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 COA7Q96BR5 231 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 TIFAQ96CG3 184 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 PAWRQ96IZ0 340 aaKnown RBP7.12□□□□□ -1.27
CKS1B-204ENST00000471245 FAM193BQ96PV7 902 aaPredicted RBP7.12□□□□□ -1.27
CKS1B-204ENST00000471245 SLC2A13Q96QE2 648 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 WRNIP1Q96S55 665 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 GTPBP4Q9BZE4 634 aaKnown RBP7.12□□□□□ -1.27
CKS1B-204ENST00000471245 DCP1AQ9NPI6 582 aaPredicted RBP7.12□□□□□ -1.27
CKS1B-204ENST00000471245 FTSJ1Q9UET6 329 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 SERPINB13Q9UIV8 391 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 COL14A1Q05707 1796 aaKnown RBP7.12□□□□□ -1.27
CKS1B-204ENST00000471245 CRYBG1Q9Y4K1 1723 aa7.12□□□□□ -1.27
CKS1B-204ENST00000471245 CHD4Q14839 1912 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 TNS3Q68CZ2 1445 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 NRP2O60462 931 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 WASP42768 502 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 IL13RA1P78552 427 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 MAP3K12Q12852 859 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 MALLQ13021 153 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 ZNF267Q14586 743 aaPredicted RBP7.11□□□□□ -1.27
CKS1B-204ENST00000471245 EZH2Q15910 746 aaKnown RBP7.11□□□□□ -1.27
CKS1B-204ENST00000471245 ADRM1Q16186 407 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 UAP1L1Q3KQV9 507 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 PPP4R4Q6NUP7 873 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 DPP8Q6V1X1 898 aaPredicted RBP7.11□□□□□ -1.27
CKS1B-204ENST00000471245 USP45Q70EL2 814 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 OR5AN1Q8NGI8 311 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 SVIPQ8NHG7 77 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 WDR48Q8TAF3 677 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 DIS3LQ8TF46 1054 aaKnown RBP7.11□□□□□ -1.27
CKS1B-204ENST00000471245 GAB3Q8WWW8 586 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 SLC39A13Q96H72 371 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 HIST1H2AHQ96KK5 128 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 MAP3K14Q99558 947 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 HIST1H2AJQ99878 128 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 NSUN3Q9H649 340 aaKnown RBP7.11□□□□□ -1.27
CKS1B-204ENST00000471245 ARHGAP20Q9P2F6 1191 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 SAP30BPQ9UHR5 308 aaKnown RBP7.11□□□□□ -1.27
CKS1B-204ENST00000471245 PTPN22Q9Y2R2 807 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 RIPOR2Q9Y4F9 1068 aa7.11□□□□□ -1.27
CKS1B-204ENST00000471245 TRPM3Q9HCF6 1732 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-204ENST00000471245 FRMPD2Q68DX3 1309 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-204ENST00000471245 TEX51A0A1B0GUA7 166 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 CTNND1O60716 968 aaKnown RBP7.1□□□□□ -1.27
CKS1B-204ENST00000471245 SEMA7AO75326 666 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 SEC24DO94855 1032 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-204ENST00000471245 PHKG2P15735 406 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 CDK17Q00537 523 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 BIRC2Q13490 618 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 OGFOD2Q6N063 350 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 CHST15Q7LFX5 561 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-204ENST00000471245 CATIPQ7Z7H3 387 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 B3GNT8Q7Z7M8 397 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 PRR18Q8N4B5 295 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 RPS6KC1Q96S38 1066 aa7.1□□□□□ -1.27
CKS1B-204ENST00000471245 NOL10Q9BSC4 688 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms