RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 VWA3BQ502W6 1294 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 FAM102BQ5T8I3 360 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 CNKSR3Q6P9H4 555 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 HAUS6Q7Z4H7 955 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 GLG1Q92896 1179 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 HPS3Q969F9 1004 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 C2orf40Q9H1Z8 148 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 NDST4Q9H3R1 872 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 TMEM134Q9H6X4 195 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 KIAA1586Q9HCI6 787 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 AGPAT3Q9NRZ7 376 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 FAM50BQ9Y247 325 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 FRMD4BQ9Y2L6 1034 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 ZMYM2Q9UBW7 1377 aa10□□□□□ -0.81
PTPRE-207ENST00000471218 RRN3P2A6NIE6 340 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 P4HA2O15460 535 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 TGFB1I1O43294 461 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 N4BP1O75113 896 aaKnown RBP9.99□□□□□ -0.81
PTPRE-207ENST00000471218 MYOGP15173 224 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 GARTP22102 1010 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 RFX1P22670 979 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 NPEPPSP55786 919 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 POU5F1Q01860 360 aaKnown RBP9.99□□□□□ -0.81
PTPRE-207ENST00000471218 CACNB1Q02641 598 aaPredicted RBP9.99□□□□□ -0.81
PTPRE-207ENST00000471218 TFF2Q03403 129 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 UBXN1Q04323 297 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 RBL2Q08999 1139 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 RAD51AP2Q09MP3 1159 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 PCBP1Q15365 356 aaKnown RBP eCLIP9.99□□□□□ -0.81
PTPRE-207ENST00000471218 CCDC40Q4G0X9 1142 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 MIIPQ5JXC2 388 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 PLA2G4FQ68DD2 849 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 CDCA2Q69YH5 1023 aaPredicted RBP9.99□□□□□ -0.81
PTPRE-207ENST00000471218 INTS8Q75QN2 995 aaKnown RBP9.99□□□□□ -0.81
PTPRE-207ENST00000471218 SYCP3Q8IZU3 236 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 C7orf31Q8N865 590 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 SPC24Q8NBT2 197 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 GLIS3Q8NEA6 775 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 ZNF397Q8NF99 534 aaPredicted RBP9.99□□□□□ -0.81
PTPRE-207ENST00000471218 PSPC1Q8WXF1 523 aaKnown RBP9.99□□□□□ -0.81
PTPRE-207ENST00000471218 SAMD11Q96NU1 681 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 TGS1Q96RS0 853 aaKnown RBP9.99□□□□□ -0.81
PTPRE-207ENST00000471218 TMX1Q9H3N1 280 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 KMT5AQ9NQR1 393 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 XPNPEP1Q9NQW7 623 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 TAB2Q9NYJ8 693 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 FBXL5Q9UKA1 691 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 MYO6Q9UM54 1294 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 TBX20Q9UMR3 447 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 INSL6Q9Y581 213 aa9.99□□□□□ -0.81
PTPRE-207ENST00000471218 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.99□□□□□ -0.81
PTPRE-207ENST00000471218 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.99□□□□□ -0.81
PTPRE-207ENST00000471218 AKR1B15C9JRZ8 316 aaPredicted RBP9.98□□□□□ -0.81
PTPRE-207ENST00000471218 ARHGAP6O43182 974 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 NCK2O43639 380 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 MFAP3LO75121 409 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 PRPF6O94906 941 aaKnown RBP9.98□□□□□ -0.81
PTPRE-207ENST00000471218 LGALS2P05162 132 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 ALADP13716 330 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 PTGS1P23219 599 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 TMOD1P28289 359 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 NMT1P30419 496 aaKnown RBP9.98□□□□□ -0.81
PTPRE-207ENST00000471218 HOXD11P31277 338 aaPredicted RBP9.98□□□□□ -0.81
PTPRE-207ENST00000471218 PEX3P56589 373 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 CDK17Q00537 523 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 TFDP1Q14186 410 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 PLCB4Q15147 1175 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 PTPROQ16827 1216 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 SLFN12LQ6IEE8 588 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 ZPBP2Q6X784 338 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 LRRC8DQ7L1W4 858 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 IFNLR1Q8IU57 520 aaPredicted RBP9.98□□□□□ -0.81
PTPRE-207ENST00000471218 NELFCDQ8IXH7 590 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 KIAA1524Q8TCG1 905 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 SYN2Q92777 582 aaPredicted RBP9.98□□□□□ -0.81
PTPRE-207ENST00000471218 BORCS6Q96GS4 357 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 FBXL18Q96ME1 805 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 LRFN3Q9BTN0 628 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 FGFBP2Q9BYJ0 223 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 POLR3FQ9H1D9 316 aaPredicted RBP9.98□□□□□ -0.81
PTPRE-207ENST00000471218 PLCB1Q9NQ66 1216 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 SPTLC3Q9NUV7 552 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 CAPN11Q9UMQ6 739 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 STYXL1Q9Y6J8 313 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 PIEZO1Q92508 2521 aa9.98□□□□□ -0.81
PTPRE-207ENST00000471218 SCN10AQ9Y5Y9 1956 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 DENND3A2RUS2 1198 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 GOLGA6L9A6NEM1 432 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 ZBTB42B2RXF5 422 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 GJB5O95377 273 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 F2P00734 622 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 AFPP02771 609 aaKnown RBP9.97□□□□□ -0.81
PTPRE-207ENST00000471218 CXCL10P02778 98 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 MMP3P08254 477 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 SKILP12757 684 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 ANXA13P27216 316 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 HNRNPH3P31942 346 aaKnown RBP9.97□□□□□ -0.81
PTPRE-207ENST00000471218 GTF2H1P32780 548 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 KCNQ1P51787 676 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 ERVK-21P61565 698 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms