RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 MATR3P43243 847 aaKnown RBP eCLIP12.68□□□□□ -0.38
FN1-217ENST00000471193 CASP4P49662 377 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 CCL23P55773 120 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 TPM4P67936 248 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 NFX1Q12986 1120 aaKnown RBP12.68□□□□□ -0.38
FN1-217ENST00000471193 DSC3Q14574 896 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 UBXN11Q5T124 520 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 SLC27A1Q6PCB7 646 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 FILIP1Q7Z7B0 1213 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 ZBTB33Q86T24 672 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 IRF2BP1Q8IU81 584 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 GPD1LQ8N335 351 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 ZSWIM2Q8NEG5 633 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 TRIM43Q96BQ3 446 aaPredicted RBP12.68□□□□□ -0.38
FN1-217ENST00000471193 SAAL1Q96ER3 474 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 EEF2KMTQ96G04 330 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 SCLYQ96I15 445 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 CNOT6LQ96LI5 555 aaKnown RBP12.68□□□□□ -0.38
FN1-217ENST00000471193 ADPGKQ9BRR6 497 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 IFIH1Q9BYX4 1025 aaKnown RBP12.68□□□□□ -0.38
FN1-217ENST00000471193 TMX1Q9H3N1 280 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 PRDM5Q9NQX1 630 aaPredicted RBP12.68□□□□□ -0.38
FN1-217ENST00000471193 CHST12Q9NRB3 414 aa12.68□□□□□ -0.38
FN1-217ENST00000471193 LTBP2Q14767 1821 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 GOLGA8IPA6NC78 632 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 GOLGA8JA6NMD2 632 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 MAPK13O15264 365 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 OGTO15294 1046 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 EXTL3O43909 919 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 MGEA5O60502 916 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 NPTXRO95502 500 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 GNA14O95837 355 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 LDHAP00338 332 aaKnown RBP12.67□□□□□ -0.38
FN1-217ENST00000471193 TIMP1P01033 207 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 ADRB2P07550 413 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 EPB41P11171 864 aaKnown RBP12.67□□□□□ -0.38
FN1-217ENST00000471193 HARSP12081 509 aaKnown RBP12.67□□□□□ -0.38
FN1-217ENST00000471193 ITGB8P26012 769 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 EEF1GP26641 437 aaKnown RBP12.67□□□□□ -0.38
FN1-217ENST00000471193 RFC2P35250 354 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 MARSP56192 900 aaKnown RBP12.67□□□□□ -0.38
FN1-217ENST00000471193 HSP90AA2PQ14568 343 aaPredicted RBP12.67□□□□□ -0.38
FN1-217ENST00000471193 PLEKHG4Q58EX7 1191 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 ZBTB41Q5SVQ8 909 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 CEP135Q66GS9 1140 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 FAM43BQ6ZT52 329 aaPredicted RBP12.67□□□□□ -0.38
FN1-217ENST00000471193 APBB1IPQ7Z5R6 666 aaPredicted RBP12.67□□□□□ -0.38
FN1-217ENST00000471193 FAM114A1Q8IWE2 563 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 TCHPQ9BT92 498 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 HTATIP2Q9BUP3 242 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 TRAIPQ9BWF2 469 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 EIF2AQ9BY44 585 aaKnown RBP12.67□□□□□ -0.38
FN1-217ENST00000471193 KIAA1586Q9HCI6 787 aa12.67□□□□□ -0.38
FN1-217ENST00000471193 KCNJ18B7U540 433 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 ATP1A3P13637 1013 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 PSMC2P35998 433 aaKnown RBP12.66□□□□□ -0.38
FN1-217ENST00000471193 GRM5P41594 1212 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 SPAG1Q07617 926 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 KCNJ12Q14500 433 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 SNRNP35Q16560 246 aaKnown RBP12.66□□□□□ -0.38
FN1-217ENST00000471193 CCDC40Q4G0X9 1142 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 HSP90AA4PQ58FG1 418 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 TCP11X2Q5H9J9 407 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 TWF2Q6IBS0 349 aaKnown RBP12.66□□□□□ -0.38
FN1-217ENST00000471193 CRELD2Q6UXH1 353 aaPredicted RBP12.66□□□□□ -0.38
FN1-217ENST00000471193 CBWD2Q8IUF1 395 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 FAM186BQ8IYM0 893 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 C7orf61Q8IZ16 206 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 CEP120Q8N960 986 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 LINC01599Q8WXQ3 324 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 SEPT8Q92599 483 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 APBB2Q92870 758 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 BORCS6Q96GS4 357 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 FAM213AQ9BRX8 229 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 FTHL17Q9BXU8 183 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 CPSF3Q9UKF6 684 aaKnown RBP12.66□□□□□ -0.38
FN1-217ENST00000471193 FRMD4BQ9Y2L6 1034 aa12.66□□□□□ -0.38
FN1-217ENST00000471193 RALGAPA2Q2PPJ7 1873 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 GOLGA6L3A6NEY3 463 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 RAG1P15918 1043 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 ZSCAN20P17040 1043 aaPredicted RBP12.65□□□□□ -0.38
FN1-217ENST00000471193 TNFSF9P41273 254 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 ACOT2P49753 483 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 RAB27AP51159 221 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 MCCD1P59942 119 aaPredicted RBP12.65□□□□□ -0.38
FN1-217ENST00000471193 CYP24A1Q07973 514 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 GSE1Q14687 1217 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 KYAT1Q16773 422 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 TCTN1Q2MV58 587 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 UVSSAQ2YD98 709 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 SEZ6Q53EL9 994 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 MFSD5Q6N075 450 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 FRMD5Q7Z6J6 570 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 BRSK2Q8IWQ3 736 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 THNSL1Q8IYQ7 743 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 DBF4BQ8NFT6 615 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 VWCEQ96DN2 955 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.38
FN1-217ENST00000471193 NXF3Q9H4D5 531 aaKnown RBP12.65□□□□□ -0.38
FN1-217ENST00000471193 METTL14Q9HCE5 456 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms