RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 SPECC1Q5M775 1068 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 NT5DC1Q5TFE4 455 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 ATF7IP2Q5U623 682 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 EEF1DP3Q658K8 133 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 DDX53Q86TM3 631 aaKnown RBP17.28■□□□□ 0.36
HDAC6-218ENST00000470942 VPS52Q8N1B4 723 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 SPRYD3Q8NCJ5 442 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 BCL7CQ8WUZ0 217 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-218ENST00000470942 RPS6KC1Q96S38 1066 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 CDCA3Q99618 268 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-218ENST00000470942 TMEM134Q9H6X4 195 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 C17orf75Q9HAS0 396 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 SNTG2Q9NY99 539 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 KCND2Q9NZV8 630 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 FAM50BQ9Y247 325 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 RBM19Q9Y4C8 960 aaKnown RBP17.28■□□□□ 0.36
HDAC6-218ENST00000470942 PHLPP2Q6ZVD8 1323 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 GRXCR2A6NFK2 248 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 NRP1O14786 923 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 INPPL1O15357 1258 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 SLC16A4O15374 487 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 NR1I2O75469 434 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 CXCL14O95715 111 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 SMTNP53814 917 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 CACNB1Q02641 598 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-218ENST00000470942 DCAF4L1Q3SXM0 396 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 FOXD4L5Q5VV16 416 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-218ENST00000470942 APBB1IPQ7Z5R6 666 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-218ENST00000470942 GPBP1Q86WP2 473 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 COLGALT2Q8IYK4 626 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 TMEM87AQ8NBN3 555 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 FOXD4L4Q8WXT5 416 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-218ENST00000470942 EPSTI1Q96J88 318 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 CLIC6Q96NY7 704 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 USP28Q96RU2 1077 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 KCNG1Q9UIX4 513 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 CD207Q9UJ71 328 aa17.27■□□□□ 0.36
HDAC6-218ENST00000470942 FBXO2Q9UK22 296 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-218ENST00000470942 PRG3Q9Y2Y8 225 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-218ENST00000470942 SRPRBQ9Y5M8 271 aaKnown RBP17.27■□□□□ 0.36
HDAC6-218ENST00000470942 TRIP11Q15643 1979 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 FSD2A1L4K1 749 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 C2orf71A6NGG8 1288 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 KRT18P05783 430 aaKnown RBP17.26■□□□□ 0.35
HDAC6-218ENST00000470942 PLS3P13797 630 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 MCM6Q14566 821 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 ARSHQ5FYA8 562 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 LLGL2Q6P1M3 1020 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 USP49Q70CQ1 688 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 MRPL43Q8N983 215 aaKnown RBP17.26■□□□□ 0.35
HDAC6-218ENST00000470942 LRRC15Q8TF66 581 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 AUTS2Q8WXX7 1259 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 RAD54LQ92698 747 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 MRPL4Q9BYD3 311 aaKnown RBP17.26■□□□□ 0.35
HDAC6-218ENST00000470942 CCSER1Q9C0I3 900 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 ZBP1Q9H171 429 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 BLOC1S4Q9NUP1 217 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 ARHGAP28Q9P2N2 729 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 CCDC39Q9UFE4 941 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 BARX2Q9UMQ3 279 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-218ENST00000470942 GDAQ9Y2T3 454 aa17.26■□□□□ 0.35
HDAC6-218ENST00000470942 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-218ENST00000470942 GLP2RO95838 553 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 SRGAP2BP0DMP2 458 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 TXLNAP40222 546 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 RBM10P98175 930 aaKnown RBP17.25■□□□□ 0.35
HDAC6-218ENST00000470942 GRIK3Q13003 919 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 STRN3Q13033 797 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 SLC39A14Q15043 492 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 STK38Q15208 465 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 TAS1R3Q7RTX0 852 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 GSTCDQ8NEC7 633 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 SPIRE2Q8WWL2 714 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 LARP4BQ92615 738 aaKnown RBP17.25■□□□□ 0.35
HDAC6-218ENST00000470942 ZNF396Q96N95 335 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-218ENST00000470942 ACO2Q99798 780 aaKnown RBP17.25■□□□□ 0.35
HDAC6-218ENST00000470942 NTPCRQ9BSD7 190 aaKnown RBP17.25■□□□□ 0.35
HDAC6-218ENST00000470942 TCHPQ9BT92 498 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 CLEC1BQ9P126 229 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 TNFSF13BQ9Y275 285 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 ZMYM2Q9UBW7 1377 aa17.25■□□□□ 0.35
HDAC6-218ENST00000470942 MBTPS2O43462 519 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 RECQL4O94761 1208 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 FAM13AO94988 1023 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 CTSAP10619 480 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 DSC1Q08554 894 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 ZBTB33Q86T24 672 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
HDAC6-218ENST00000470942 VN1R2Q8NFZ6 395 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 MSLNLQ96KJ4 702 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 REEP2Q9BRK0 252 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 TARS2Q9BW92 718 aaKnown RBP17.24■□□□□ 0.35
HDAC6-218ENST00000470942 COLEC11Q9BWP8 271 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 VN1R3Q9BXE9 311 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 LARSQ9P2J5 1176 aaKnown RBP17.24■□□□□ 0.35
HDAC6-218ENST00000470942 TFIP11Q9UBB9 837 aaKnown RBP17.24■□□□□ 0.35
HDAC6-218ENST00000470942 DAXXQ9UER7 740 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-218ENST00000470942 STK39Q9UEW8 545 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 ODF2LQ9ULJ1 636 aa17.24■□□□□ 0.35
HDAC6-218ENST00000470942 CLASP2O75122 1294 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms