RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 PES1O00541 588 aaKnown RBP9.48□□□□□ -0.89
HDLBP-233ENST00000470710 OGTO15294 1046 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 PMM2O15305 246 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 FAM189A1O60320 539 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 STX10O60499 249 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 CSDE1O75534 798 aaKnown RBP9.48□□□□□ -0.89
HDLBP-233ENST00000470710 ERLIN2O94905 339 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 SGPL1O95470 568 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 AFPP02771 609 aaKnown RBP9.48□□□□□ -0.89
HDLBP-233ENST00000470710 MCF2P10911 925 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 ARF4P18085 180 aaPredicted RBP9.48□□□□□ -0.89
HDLBP-233ENST00000470710 AXLP30530 894 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 GTF2H1P32780 548 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 CDK7P50613 346 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 VAMP7P51809 220 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 NCBP1Q09161 790 aaKnown RBP9.48□□□□□ -0.89
HDLBP-233ENST00000470710 MGAT3Q09327 533 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 TMEM62Q0P6H9 643 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 KCNH2Q12809 1159 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 TRIM14Q14142 442 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 KYAT1Q16773 422 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 TMEM132AQ24JP5 1023 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 ZNF568Q3ZCX4 644 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 FAM26DQ5JW98 314 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 CRELD2Q6UXH1 353 aaPredicted RBP9.48□□□□□ -0.89
HDLBP-233ENST00000470710 CATSPER4Q7RTX7 472 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 TMC6Q7Z403 805 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 APBB1IPQ7Z5R6 666 aaPredicted RBP9.48□□□□□ -0.89
HDLBP-233ENST00000470710 USP37Q86T82 979 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 SPC24Q8NBT2 197 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 U2AF1L4Q8WU68 220 aaKnown RBP9.48□□□□□ -0.89
HDLBP-233ENST00000470710 DHX38Q92620 1227 aaKnown RBP9.48□□□□□ -0.89
HDLBP-233ENST00000470710 WNT8BQ93098 351 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 IQCDQ96DY2 449 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 CCDC51Q96ER9 411 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 FAM213AQ9BRX8 229 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 CDT1Q9H211 546 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 PDZD7Q9H5P4 517 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 TRMT13Q9NUP7 481 aaKnown RBP9.48□□□□□ -0.89
HDLBP-233ENST00000470710 ANKFY1Q9P2R3 1169 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 NOD1Q9Y239 953 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 CDY2AQ9Y6F7 541 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 KAT6AQ92794 2004 aa9.48□□□□□ -0.89
HDLBP-233ENST00000470710 P4HA2O15460 535 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 N4BP1O75113 896 aaKnown RBP9.47□□□□□ -0.89
HDLBP-233ENST00000470710 MYCP01106 439 aaPredicted RBP9.47□□□□□ -0.89
HDLBP-233ENST00000470710 CHRNA1P02708 482 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 HOXA11P31270 313 aaPredicted RBP9.47□□□□□ -0.89
HDLBP-233ENST00000470710 THPOP40225 353 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 MATR3P43243 847 aaKnown RBP eCLIP9.47□□□□□ -0.89
HDLBP-233ENST00000470710 MNX1P50219 401 aaPredicted RBP9.47□□□□□ -0.89
HDLBP-233ENST00000470710 GSDMDP57764 484 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 CLDN10P78369 228 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 RBL2Q08999 1139 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 TBX2Q13207 712 aaPredicted RBP9.47□□□□□ -0.89
HDLBP-233ENST00000470710 PSMD6Q15008 389 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 SYCP1Q15431 976 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 DCAF4L1Q3SXM0 396 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 HS1BP3Q53T59 392 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 DCAF17Q5H9S7 520 aaPredicted RBP9.47□□□□□ -0.89
HDLBP-233ENST00000470710 C1orf220Q5T0J3 134 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 TCERG1LQ5VWI1 586 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 EEF1DP3Q658K8 133 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 NOTUMQ6P988 496 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 BRSK2Q8IWQ3 736 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 ANKLE1Q8NAG6 615 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 RDH13Q8NBN7 331 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 PLEKHO2Q8TD55 490 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 PARD3BQ8TEW8 1205 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 TMEM40Q8WWA1 233 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 TCHPQ9BT92 498 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 PRDM10Q9NQV6 1147 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 AGPAT5Q9NUQ2 364 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 GINS2Q9Y248 185 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 SIK3Q9Y2K2 1263 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.47□□□□□ -0.892e-9■■■□□ 16.2
HDLBP-233ENST00000470710 SQORQ9Y6N5 450 aa9.47□□□□□ -0.89
HDLBP-233ENST00000470710 EVPLQ92817 2033 aa9.46□□□□□ -0.89
HDLBP-233ENST00000470710 B4GALT4O60513 344 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 TFRCP02786 760 aaKnown RBP9.46□□□□□ -0.9
HDLBP-233ENST00000470710 PTMAP06454 111 aaKnown RBP9.46□□□□□ -0.9
HDLBP-233ENST00000470710 CLTAP09496 248 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 TRIM49P0CI25 452 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 TRIM49CP0CI26 452 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 COL6A1P12109 1028 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 FGFR4P22455 802 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 GJA8P48165 433 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 FMO5P49326 533 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 ACOT2P49753 483 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 SURF1Q15526 300 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 FIGNQ5HY92 759 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 ZBTB41Q5SVQ8 909 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 C1orf53Q5VUE5 145 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 SLC27A1Q6PCB7 646 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 ZBTB33Q86T24 672 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 FAM228AQ86W67 206 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 FAM126BQ8IXS8 530 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 CCDC150Q8NCX0 1101 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 CAGE1Q8TC20 777 aa9.46□□□□□ -0.9
HDLBP-233ENST00000470710 CPB2Q96IY4 423 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms