RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 LINC01465Q8N7H1 131 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 CNNM3Q8NE01 707 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 RDM1Q8NG50 284 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 RMDN1Q96DB5 314 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 KLHL5Q96PQ7 755 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 TMEM175Q9BSA9 504 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 ZMYND12Q9H0C1 365 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 PLEKHA4Q9H4M7 779 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 NRDE2Q9H7Z3 1164 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 PIDD1Q9HB75 910 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 WDR6Q9NNW5 1121 aaKnown RBP9.93□□□□□ -0.82
XRN1-208ENST00000470537 FAM105AQ9NUU6 356 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 TBC1D13Q9NVG8 400 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 EPS15L1Q9UBC2 864 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 PIN4Q9Y237 131 aaKnown RBP9.93□□□□□ -0.82
XRN1-208ENST00000470537 INPP5FQ9Y2H2 1132 aa9.93□□□□□ -0.82
XRN1-208ENST00000470537 CNTNAP5Q8WYK1 1306 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 CNTNAP2Q9UHC6 1331 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 CCDC195A0A1B0GUA6 201 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 DKC1O60832 514 aaKnown RBP eCLIP9.92□□□□□ -0.82
XRN1-208ENST00000470537 GAS7O60861 476 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 KINO60870 393 aaKnown RBP9.92□□□□□ -0.82
XRN1-208ENST00000470537 OFD1O75665 1012 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 HMGB1P09429 215 aaKnown RBP9.92□□□□□ -0.82
XRN1-208ENST00000470537 CNPP09543 421 aaKnown RBP9.92□□□□□ -0.82
XRN1-208ENST00000470537 CIITAP33076 1130 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 USP11P51784 963 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 FGD1P98174 961 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 PRKCEQ02156 737 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 XKR3Q5GH77 459 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 CATSPER4Q7RTX7 472 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 C1orf210Q8IVY1 113 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 SLC44A3Q8N4M1 653 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 AUTS2Q8WXX7 1259 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 PHKBQ93100 1093 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 NIFKQ9BYG3 293 aaKnown RBP9.92□□□□□ -0.82
XRN1-208ENST00000470537 C22orf23Q9BZE7 217 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 GBP3Q9H0R5 595 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 DMDP11532 3685 aa9.92□□□□□ -0.82
XRN1-208ENST00000470537 SLC27A2O14975 620 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 GLUD1P00367 558 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 SOD2P04179 222 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 AK2P54819 239 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 CREMQ03060 361 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 KRT32Q14532 448 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 NECTIN1Q15223 517 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 PCBP1Q15365 356 aaKnown RBP eCLIP9.91□□□□□ -0.82
XRN1-208ENST00000470537 PFKFB3Q16875 520 aaPredicted RBP9.91□□□□□ -0.82
XRN1-208ENST00000470537 CREB3L3Q68CJ9 461 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 KANK3Q6NY19 840 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 DHX32Q7L7V1 743 aaKnown RBP9.91□□□□□ -0.82
XRN1-208ENST00000470537 RAB11FIP4Q86YS3 637 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 GPR65Q8IYL9 337 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 HACE1Q8IYU2 909 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 CCDC148Q8NFR7 591 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 EXOC6Q8TAG9 804 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 CRYGNQ8WXF5 182 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 RPS6KC1Q96S38 1066 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 TEKT3Q9BXF9 490 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 TBC1D17Q9HA65 648 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 MAN1C1Q9NR34 630 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.91□□□□□ -0.82
XRN1-208ENST00000470537 DLL3Q9NYJ7 618 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 SUCLA2Q9P2R7 463 aaPredicted RBP9.91□□□□□ -0.82
XRN1-208ENST00000470537 PCDHB2Q9Y5E7 798 aa9.91□□□□□ -0.82
XRN1-208ENST00000470537 CLUHO75153 1309 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 A0A087WZ62 844 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 GOLGA8AA7E2F4 631 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 GOLGA8BA8MQT2 603 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 NCAM2O15394 837 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 LILRB3O75022 631 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 SSBP05455 408 aaKnown RBP eCLIP9.9□□□□□ -0.82
XRN1-208ENST00000470537 FGFR4P22455 802 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 MAGEA9P43362 315 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 SLC11A1P49279 550 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 TARBP2Q15633 366 aaKnown RBP9.9□□□□□ -0.82
XRN1-208ENST00000470537 ZNF528Q3MIS6 628 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 LRCH2Q5VUJ6 765 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 DESI1Q6ICB0 168 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 MRPL14Q6P1L8 145 aaKnown RBP9.9□□□□□ -0.82
XRN1-208ENST00000470537 DCLRE1AQ6PJP8 1040 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 TMEM173Q86WV6 379 aaPredicted RBP9.9□□□□□ -0.82
XRN1-208ENST00000470537 RHPN2Q8IUC4 686 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 ATRIPQ8WXE1 791 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 SLC7A3Q8WY07 619 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 SMG7Q92540 1137 aaKnown RBP9.9□□□□□ -0.82
XRN1-208ENST00000470537 ZNF668Q96K58 619 aaPredicted RBP9.9□□□□□ -0.82
XRN1-208ENST00000470537 FDXACB1Q9BRP7 624 aaPredicted RBP9.9□□□□□ -0.82
XRN1-208ENST00000470537 LRRC2Q9BYS8 371 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 BCO2Q9BYV7 579 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 RSAD1Q9HA92 442 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 ANO2Q9NQ90 1003 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 ARHGEF3Q9NR81 526 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 SLC2A4RGQ9NR83 387 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 ZDHHC7Q9NXF8 308 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 NAP1L2Q9ULW6 460 aaPredicted RBP9.9□□□□□ -0.82
XRN1-208ENST00000470537 PPME1Q9Y570 386 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 R4GN57 208 aa9.9□□□□□ -0.82
XRN1-208ENST00000470537 IGKV6-21A0A0C4DH24 114 aa9.89□□□□□ -0.83
XRN1-208ENST00000470537 MED19A0JLT2 244 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms