RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	JAM2	P57087	298 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	PTEN	P60484	403 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	GNG11	P61952	73 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	TUBB4B	P68371	445 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	NCBP1	Q09161	790 aa	Known RBP	11.91	□□□□□ -0.5
SND1-208	ENST00000470463	PPFIA1	Q13136	1202 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	CBWD6	Q4V339	395 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	EPC2	Q52LR7	807 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	CBWD3	Q5JTY5	395 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	CBWD5	Q5RIA9	395 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	SLC39A4	Q6P5W5	647 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	SYT10	Q6XYQ8	523 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	TLK2	Q86UE8	772 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	RHPN2	Q8IUC4	686 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	METTL13	Q8N6R0	699 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	FBXL13	Q8NEE6	735 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	MYRIP	Q8NFW9	859 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	DESI2	Q9BSY9	194 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	MSTO1	Q9BUK6	570 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	CFHR5	Q9BXR6	569 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	IFIH1	Q9BYX4	1025 aa	Known RBP	11.91	□□□□□ -0.5
SND1-208	ENST00000470463	RNPEP	Q9H4A4	650 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	SIX2	Q9NPC8	291 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	ARHGAP20	Q9P2F6	1191 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	GNE	Q9Y223	722 aa	Known RBP	11.91	□□□□□ -0.5
SND1-208	ENST00000470463	SI	P14410	1827 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.9	□□□□□ -0.5
SND1-208	ENST00000470463	OGT	O15294	1046 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	DYNC1LI2	O43237	492 aa	Predicted RBP	11.9	□□□□□ -0.5
SND1-208	ENST00000470463	F2	P00734	622 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	IGHA2	P01877	340 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	TRIM49	P0CI25	452 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	TRIM49C	P0CI26	452 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	SRGAP2C	P0DJJ0	459 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	HOXD10	P28358	340 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
SND1-208	ENST00000470463	GPC3	P51654	580 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	MCL1	Q07820	350 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	BMS1	Q14692	1282 aa	Known RBP	11.9	□□□□□ -0.5
SND1-208	ENST00000470463	GRIK4	Q16099	956 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	SLC18A3	Q16572	532 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	ASTE1	Q2TB18	679 aa	Predicted RBP	11.9	□□□□□ -0.5
SND1-208	ENST00000470463	CCDC122	Q5T0U0	273 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	HGSNAT	Q68CP4	663 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	DPY19L2P1	Q6NXN4	242 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	MTHFD1L	Q6UB35	978 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	TSHZ1	Q6ZSZ6	1077 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	SRGAP1	Q7Z6B7	1085 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	CBWD2	Q8IUF1	395 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	RNF10	Q8N5U6	811 aa	Known RBP	11.9	□□□□□ -0.5
SND1-208	ENST00000470463	LINC01465	Q8N7H1	131 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	ACRBP	Q8NEB7	543 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	JAKMIP2	Q96AA8	810 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	CALR3	Q96L12	384 aa	Known RBP	11.9	□□□□□ -0.5
SND1-208	ENST00000470463	ACO2	Q99798	780 aa	Known RBP	11.9	□□□□□ -0.5
SND1-208	ENST00000470463	FAM213A	Q9BRX8	229 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	TCHP	Q9BT92	498 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	INO80B	Q9C086	356 aa	Predicted RBP	11.9	□□□□□ -0.5
SND1-208	ENST00000470463	TMEM117	Q9H0C3	514 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	IKZF4	Q9H2S9	585 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	FZD8	Q9H461	694 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	SPC25	Q9HBM1	224 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	DNAI1	Q9UI46	699 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	DNAJC12	Q9UKB3	198 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	TNFSF13B	Q9Y275	285 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	FHOD1	Q9Y613	1164 aa		11.9	□□□□□ -0.5
SND1-208	ENST00000470463	GOLGA8IP	A6NC78	632 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	GOLGA8J	A6NMD2	632 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.89	□□□□□ -0.51
SND1-208	ENST00000470463	TISP43	B9A030	160 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463		F8VZ95	297 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	DUSP11	O75319	330 aa	Known RBP	11.89	□□□□□ -0.51
SND1-208	ENST00000470463	GNRH1	P01148	92 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	ADRB2	P07550	413 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	CYP2B6	P20813	491 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	GCLM	P48507	274 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	LACTB	P83111	547 aa	Predicted RBP	11.89	□□□□□ -0.51
SND1-208	ENST00000470463	PPP3CA	Q08209	521 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	MKRN4P	Q13434	485 aa	Predicted RBP	11.89	□□□□□ -0.51
SND1-208	ENST00000470463	PRPF4B	Q13523	1007 aa	Known RBP	11.89	□□□□□ -0.51
SND1-208	ENST00000470463	ARHGEF6	Q15052	776 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	IFI16	Q16666	785 aa	Known RBP	11.89	□□□□□ -0.51
SND1-208	ENST00000470463	TMEM132A	Q24JP5	1023 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	WDR44	Q5JSH3	913 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	IQCE	Q6IPM2	695 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.89	□□□□□ -0.51
SND1-208	ENST00000470463	MPZL3	Q6UWV2	235 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	LRRC71	Q8N4P6	559 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	TRIM58	Q8NG06	486 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	LMO3	Q8TAP4	145 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	UBE2Q2	Q8WVN8	375 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	DHX38	Q92620	1227 aa	Known RBP	11.89	□□□□□ -0.51
SND1-208	ENST00000470463	SAAL1	Q96ER3	474 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	NLRP4	Q96MN2	994 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	NT5C1B	Q96P26	610 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	ALS2CR12	Q96Q35	445 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	CGRRF1	Q99675	332 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	TARS2	Q9BW92	718 aa	Known RBP	11.89	□□□□□ -0.51
SND1-208	ENST00000470463	LZTFL1	Q9NQ48	299 aa		11.89	□□□□□ -0.51
SND1-208	ENST00000470463	RAB20	Q9NX57	234 aa		11.89	□□□□□ -0.51

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