RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ZNF131P52739 623 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 SMTNP53814 917 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
TOP3B-215ENST00000470338 DSC1Q08554 894 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 GIT2Q14161 759 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 DHX8Q14562 1220 aaKnown RBP15.56■□□□□ 0.08
TOP3B-215ENST00000470338 TMEM132AQ24JP5 1023 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 ATF7IP2Q5U623 682 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 ATL3Q6DD88 541 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 ADGRD2Q7Z7M1 963 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 TMEM173Q86WV6 379 aaPredicted RBP15.56■□□□□ 0.08
TOP3B-215ENST00000470338 TMEM161BQ8NDZ6 487 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 MICAL1Q8TDZ2 1067 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 PPP2R3CQ969Q6 453 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 IGSF21Q96ID5 467 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 FAM193BQ96PV7 902 aaPredicted RBP15.56■□□□□ 0.08
TOP3B-215ENST00000470338 ACO2Q99798 780 aaKnown RBP15.56■□□□□ 0.08
TOP3B-215ENST00000470338 REEP2Q9BRK0 252 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 COL25A1Q9BXS0 654 aaPredicted RBP15.56■□□□□ 0.08
TOP3B-215ENST00000470338 GBP3Q9H0R5 595 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 PTPRHQ9HD43 1115 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 LARSQ9P2J5 1176 aaKnown RBP15.56■□□□□ 0.08
TOP3B-215ENST00000470338 PCDHGC5Q9Y5F6 944 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 CUL9Q8IWT3 2517 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 CSPG5O95196 566 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 MAPTP10636 758 aaKnown RBP15.55■□□□□ 0.08
TOP3B-215ENST00000470338 GTF2F1P35269 517 aaKnown RBP eCLIP15.55■□□□□ 0.08
TOP3B-215ENST00000470338 LTBRP36941 435 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 TXLNAP40222 546 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 SCNN1GP51170 649 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 KCNQ1P51787 676 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 NCKAP1LP55160 1127 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 ADAM15Q13444 863 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 DCAF4L1Q3SXM0 396 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 LEXMQ3ZCV2 418 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 RRAGBQ5VZM2 374 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 DDX53Q86TM3 631 aaKnown RBP15.55■□□□□ 0.08
TOP3B-215ENST00000470338 COLGALT2Q8IYK4 626 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 TMEM169Q96HH4 297 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 MRPL4Q9BYD3 311 aaKnown RBP15.55■□□□□ 0.08
TOP3B-215ENST00000470338 NGRNQ9NPE2 291 aaKnown RBP15.55■□□□□ 0.08
TOP3B-215ENST00000470338 SNTG2Q9NY99 539 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 PARP2Q9UGN5 583 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 FAN1Q9Y2M0 1017 aa15.55■□□□□ 0.08
TOP3B-215ENST00000470338 TTC28Q96AY4 2481 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 H0YCG3 227 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 DLL1O00548 723 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 NRP1O14786 923 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 KCNA5P22460 613 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 PROZP22891 400 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 CCDC73Q6ZRK6 1079 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 APBB1IPQ7Z5R6 666 aaPredicted RBP15.54■□□□□ 0.08
TOP3B-215ENST00000470338 EFHBQ8N7U6 833 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 BCL7CQ8WUZ0 217 aaPredicted RBP15.54■□□□□ 0.08
TOP3B-215ENST00000470338 TCF25Q9BQ70 676 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 TARS2Q9BW92 718 aaKnown RBP15.54■□□□□ 0.08
TOP3B-215ENST00000470338 IGFLR1Q9H665 355 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 TLE6Q9H808 572 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 CLDND1Q9NY35 253 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 KLK14Q9P0G3 267 aa15.54■□□□□ 0.08
TOP3B-215ENST00000470338 A0A087X0B3 334 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 ABLIM1O14639 778 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 CUTAO60888 179 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 FAM13AO94988 1023 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 BRD1O95696 1058 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 SCP2P22307 547 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 NRIP1P48552 1158 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 GRIK3Q13003 919 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 STRN3Q13033 797 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 AXDND1Q5T1B0 1012 aaPredicted RBP15.53■□□□□ 0.08
TOP3B-215ENST00000470338 PLPP4Q5VZY2 271 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 TMC7Q7Z402 723 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 HAUS6Q7Z4H7 955 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 RBM23Q86U06 439 aaKnown RBP15.53■□□□□ 0.08
TOP3B-215ENST00000470338 MYCT1Q8N699 235 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 MRPL43Q8N983 215 aaKnown RBP15.53■□□□□ 0.08
TOP3B-215ENST00000470338 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.53■□□□□ 0.08
TOP3B-215ENST00000470338 CDCA3Q99618 268 aaPredicted RBP15.53■□□□□ 0.08
TOP3B-215ENST00000470338 VN1R3Q9BXE9 311 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 PANK2Q9BZ23 570 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 ZBP1Q9H171 429 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 PARVGQ9HBI0 331 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 ENTPD7Q9NQZ7 604 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 ZDHHC9Q9Y397 364 aa15.53■□□□□ 0.08
TOP3B-215ENST00000470338 PDCD11Q14690 1871 aaKnown RBP15.52■□□□□ 0.08
TOP3B-215ENST00000470338 HIDE1A8MVS5 230 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 PTGESO14684 152 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 LINC01565O15544 149 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 TRAK2O60296 914 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 RECQL4O94761 1208 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 EFEMP2O95967 443 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 KRT18P05783 430 aaKnown RBP15.52■□□□□ 0.08
TOP3B-215ENST00000470338 DLX2Q07687 328 aaPredicted RBP15.52■□□□□ 0.08
TOP3B-215ENST00000470338 KCNC3Q14003 757 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 SMC1AQ14683 1233 aaKnown RBP15.52■□□□□ 0.08
TOP3B-215ENST00000470338 DUSP6Q16828 381 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 FOXD4L6Q3SYB3 417 aaPredicted RBP15.52■□□□□ 0.08
TOP3B-215ENST00000470338 FOXD4L3Q6VB84 417 aaPredicted RBP15.52■□□□□ 0.08
TOP3B-215ENST00000470338 ZPBP2Q6X784 338 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 SV2BQ7L1I2 683 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms