RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.47□□□□□ -1.21
COL11A1-208ENST00000470170 C19orf54Q5BKX5 351 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 LAIR1Q6GTX8 287 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 LRRC55Q6ZSA7 311 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 GPRIN1Q7Z2K8 1008 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 VRK3Q8IV63 474 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 GPRC5DQ9NZD1 345 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 DPP7Q9UHL4 492 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 APOBEC2Q9Y235 224 aaKnown RBP7.47□□□□□ -1.21
COL11A1-208ENST00000470170 ABHD16AO95870 558 aa7.46□□□□□ -1.22
COL11A1-208ENST00000470170 ENPP1P22413 925 aa7.46□□□□□ -1.22
COL11A1-208ENST00000470170 KRTAP15-1Q3LI76 137 aa7.46□□□□□ -1.22
COL11A1-208ENST00000470170 GIMAP6Q6P9H5 292 aa7.46□□□□□ -1.22
COL11A1-208ENST00000470170 KCNV1Q6PIU1 500 aa7.46□□□□□ -1.22
COL11A1-208ENST00000470170 CMIPQ8IY22 773 aa7.46□□□□□ -1.22
COL11A1-208ENST00000470170 TRPM5Q9NZQ8 1165 aa7.46□□□□□ -1.22
COL11A1-208ENST00000470170 TMEM191CA6NGB0 347 aa7.45□□□□□ -1.22
COL11A1-208ENST00000470170 ADCY6O43306 1168 aa7.45□□□□□ -1.22
COL11A1-208ENST00000470170 CCT2P78371 535 aaKnown RBP7.45□□□□□ -1.22
COL11A1-208ENST00000470170 CDK17Q00537 523 aa7.45□□□□□ -1.22
COL11A1-208ENST00000470170 LY6G5CQ5SRR4 150 aa7.45□□□□□ -1.22
COL11A1-208ENST00000470170 MBNL2Q5VZF2 373 aaKnown RBP7.45□□□□□ -1.22
COL11A1-208ENST00000470170 SYT12Q8IV01 421 aa7.45□□□□□ -1.22
COL11A1-208ENST00000470170 TGFBRAP1Q8WUH2 860 aa7.45□□□□□ -1.22
COL11A1-208ENST00000470170 CEP95Q96GE4 821 aa7.45□□□□□ -1.22
COL11A1-208ENST00000470170 ACAP3Q96P50 834 aa7.45□□□□□ -1.22
COL11A1-208ENST00000470170 CAAP1Q9H8G2 361 aa7.45□□□□□ -1.22
COL11A1-208ENST00000470170 HS3ST4Q9Y661 456 aa7.45□□□□□ -1.22
COL11A1-208ENST00000470170 TIGD2Q4W5G0 525 aa7.44□□□□□ -1.22
COL11A1-208ENST00000470170 PRAMEF14Q5SWL7 426 aa7.44□□□□□ -1.22
COL11A1-208ENST00000470170 BTNL9Q6UXG8 535 aa7.44□□□□□ -1.22
COL11A1-208ENST00000470170 GDF7Q7Z4P5 450 aa7.44□□□□□ -1.22
COL11A1-208ENST00000470170 RNF169Q8NCN4 708 aa7.44□□□□□ -1.22
COL11A1-208ENST00000470170 OR10H5Q8NGA6 315 aa7.44□□□□□ -1.22
COL11A1-208ENST00000470170 ZNF480Q8WV37 535 aa7.44□□□□□ -1.22
COL11A1-208ENST00000470170 SLC46A2Q9BY10 475 aa7.44□□□□□ -1.22
COL11A1-208ENST00000470170 KRTAP17-1Q9BYP8 105 aa7.44□□□□□ -1.22
COL11A1-208ENST00000470170 SLKQ9H2G2 1235 aaPredicted RBP7.44□□□□□ -1.22
COL11A1-208ENST00000470170 VTA1Q9NP79 307 aa7.44□□□□□ -1.22
COL11A1-208ENST00000470170 B5MCH6 92 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 LPXNO60711 386 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 LAG3P18627 525 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 HSD3B2P26439 372 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 SOX5P35711 763 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 RNASE9P60153 205 aaKnown RBP7.43□□□□□ -1.22
COL11A1-208ENST00000470170 NHLH2Q02577 135 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 COL10A1Q03692 680 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 PTPAQ15257 358 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 IQSEC1Q6DN90 963 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 TSPEARQ8WU66 669 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 RAX2Q96IS3 184 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 TEX101Q9BY14 249 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 QRSL1Q9H0R6 528 aaKnown RBP7.43□□□□□ -1.22
COL11A1-208ENST00000470170 CLCA2Q9UQC9 943 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
COL11A1-208ENST00000470170 CHST2Q9Y4C5 530 aa7.43□□□□□ -1.22
COL11A1-208ENST00000470170 NCR1O76036 304 aa7.42□□□□□ -1.22
COL11A1-208ENST00000470170 GASTP01350 101 aa7.42□□□□□ -1.22
COL11A1-208ENST00000470170 MST1LQ2TV78 715 aa7.42□□□□□ -1.22
COL11A1-208ENST00000470170 MFSD14BQ5SR56 506 aa7.42□□□□□ -1.22
COL11A1-208ENST00000470170 SDE2Q6IQ49 451 aa7.42□□□□□ -1.22
COL11A1-208ENST00000470170 AFAP1L2Q8N4X5 818 aa7.42□□□□□ -1.22
COL11A1-208ENST00000470170 REPS2Q8NFH8 660 aa7.42□□□□□ -1.22
COL11A1-208ENST00000470170 CHAC2Q8WUX2 184 aa7.42□□□□□ -1.22
COL11A1-208ENST00000470170 DCLRE1CQ96SD1 692 aaKnown RBP7.42□□□□□ -1.22
COL11A1-208ENST00000470170 RPTORQ8N122 1335 aa7.42□□□□□ -1.22
COL11A1-208ENST00000470170 CENPVL1A0A0U1RR11 272 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 GOLGA8AA7E2F4 631 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 TBKBP1A7MCY6 615 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 PPFIA4O75335 1185 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 ZSCAN20P17040 1043 aaPredicted RBP7.41□□□□□ -1.22
COL11A1-208ENST00000470170 ADSLP30566 484 aaPredicted RBP7.41□□□□□ -1.22
COL11A1-208ENST00000470170 CRHR1P34998 444 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 MASP1P48740 699 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 SCAND1P57086 179 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 CT47A1Q5JQC4 288 aaPredicted RBP7.41□□□□□ -1.22
COL11A1-208ENST00000470170 EFCAB12Q6NXP0 572 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 DRICH1Q6PGQ1 229 aaPredicted RBP7.41□□□□□ -1.22
COL11A1-208ENST00000470170 PDZD4Q76G19 769 aaPredicted RBP7.41□□□□□ -1.22
COL11A1-208ENST00000470170 LMBR1Q8WVP7 490 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 RIN2Q8WYP3 895 aaPredicted RBP7.41□□□□□ -1.22
COL11A1-208ENST00000470170 TFAP2CQ92754 450 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 MYEOVQ96EZ4 313 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 PAWRQ96IZ0 340 aaKnown RBP7.41□□□□□ -1.22
COL11A1-208ENST00000470170 AKIP1Q9NQ31 210 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 POGKQ9P215 609 aa7.41□□□□□ -1.22
COL11A1-208ENST00000470170 GRID2IPA4D2P6 1211 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 ZNF185O15231 689 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 AKR1B10O60218 316 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 BRINP1O60477 761 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 GCP02774 474 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 MRPS9P82933 396 aaKnown RBP7.4□□□□□ -1.22
COL11A1-208ENST00000470170 TMPRSS15P98073 1019 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 STAT4Q14765 748 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 BMT2Q1RMZ1 405 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 FBXO18Q8NFZ0 1043 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 SLC35B2Q8TB61 432 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 AUTS2Q8WXX7 1259 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 ZG16BQ96DA0 208 aa7.4□□□□□ -1.22
COL11A1-208ENST00000470170 ANKFY1Q9P2R3 1169 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms