RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 TMEM169Q96HH4 297 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 MRPL9Q9BYD2 267 aaKnown RBP12.86□□□□□ -0.35
FAM228B-203ENST00000469867 CLSTN2Q9H4D0 955 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 ZSWIM4Q9H7M6 989 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 USP27XA6NNY8 438 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 DKC1O60832 514 aaKnown RBP eCLIP12.85□□□□□ -0.35
FAM228B-203ENST00000469867 SLITRK3O94933 977 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 TECP42680 631 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 RNASELQ05823 741 aaKnown RBP12.85□□□□□ -0.35
FAM228B-203ENST00000469867 EMC2Q15006 297 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 ATL3Q6DD88 541 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 PDE12Q6L8Q7 609 aaKnown RBP12.85□□□□□ -0.35
FAM228B-203ENST00000469867 USP49Q70CQ1 688 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 FMR1NBQ8N0W7 255 aaPredicted RBP12.85□□□□□ -0.35
FAM228B-203ENST00000469867 SLC39A11Q8N1S5 342 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 AUTS2Q8WXX7 1259 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 TRAIPQ9BWF2 469 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 NGRNQ9NPE2 291 aaKnown RBP12.85□□□□□ -0.35
FAM228B-203ENST00000469867 AGPAT5Q9NUQ2 364 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 TBC1D13Q9NVG8 400 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 PCDHB2Q9Y5E7 798 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 TXKP42681 527 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 KCNC3Q14003 757 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 CALCRLQ16602 461 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 OTUD6AQ7L8S5 288 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 MRPL43Q8N983 215 aaKnown RBP12.85□□□□□ -0.35
FAM228B-203ENST00000469867 KCNG4Q8TDN1 519 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 CDCA3Q99618 268 aaPredicted RBP12.85□□□□□ -0.35
FAM228B-203ENST00000469867 NAP1L4Q99733 375 aaKnown RBP12.85□□□□□ -0.35
FAM228B-203ENST00000469867 DNAJB4Q9UDY4 337 aa12.85□□□□□ -0.35
FAM228B-203ENST00000469867 B4GALT3O60512 393 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 HOXA11P31270 313 aaPredicted RBP12.84□□□□□ -0.35
FAM228B-203ENST00000469867 NOMO2Q5JPE7 1267 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 HFE2Q6ZVN8 426 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 VPS52Q8N1B4 723 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 EIF2AK1Q9BQI3 630 aaKnown RBP12.84□□□□□ -0.35
FAM228B-203ENST00000469867 OGFRQ9NZT2 677 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 HCFC2Q9Y5Z7 792 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 C2orf71A6NGG8 1288 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 POTEMA6NI47 508 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 NEMFO60524 1076 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 PFKFB1P16118 471 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 RFC5P40937 340 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 FAM160A1Q05DH4 1040 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 CBX2Q14781 532 aaPredicted RBP12.84□□□□□ -0.35
FAM228B-203ENST00000469867 SYCE2Q6PIF2 218 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 AGMOQ6ZNB7 445 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 ZNF280BQ86YH2 543 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 PIGOQ8TEQ8 1089 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 HSD17B14Q9BPX1 270 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 PHF7Q9BWX1 381 aaPredicted RBP12.84□□□□□ -0.35
FAM228B-203ENST00000469867 NRDE2Q9H7Z3 1164 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 XPNPEP1Q9NQW7 623 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 MYO10Q9HD67 2058 aa12.84□□□□□ -0.35
FAM228B-203ENST00000469867 ZNF623O75123 536 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 TNNT1P13805 278 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 ZNF174Q15697 407 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 HERC4Q5GLZ8 1057 aaPredicted RBP12.83□□□□□ -0.36
FAM228B-203ENST00000469867 CCDC73Q6ZRK6 1079 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 BCL7CQ8WUZ0 217 aaPredicted RBP12.83□□□□□ -0.36
FAM228B-203ENST00000469867 MTRQ99707 1265 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 DDX19AQ9NUU7 478 aaKnown RBP12.83□□□□□ -0.36
FAM228B-203ENST00000469867 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.83□□□□□ -0.36
FAM228B-203ENST00000469867 ERLIN2O94905 339 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 SKIP12755 728 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 RAB27AP51159 221 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 SMC1AQ14683 1233 aaKnown RBP12.83□□□□□ -0.36
FAM228B-203ENST00000469867 ANKRD54Q6NXT1 300 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 DRC7Q8IY82 874 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 EXOC8Q8IYI6 725 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 SUSD6Q92537 303 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 S1PR5Q9H228 398 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 HES2Q9Y543 173 aa12.83□□□□□ -0.36
FAM228B-203ENST00000469867 LOC730098B7Z3J9 87 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 INO80B-WBP1J3KQ70 363 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 CXCL14O95715 111 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 POMCP01189 267 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 GALTP07902 379 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 WEE2P0C1S8 567 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 SRGAP2BP0DMP2 458 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 MCM7P33993 719 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 TYRO3Q06418 890 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 KMT5BQ4FZB7 885 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 TMEM184AQ6ZMB5 413 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 SRGAP1Q7Z6B7 1085 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 TCP11Q8WWU5 503 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 IGSF21Q96ID5 467 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 CCDC43Q96MW1 224 aaKnown RBP12.82□□□□□ -0.36
FAM228B-203ENST00000469867 TMEM60Q9H2L4 133 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 FBXO2Q9UK22 296 aaPredicted RBP12.82□□□□□ -0.36
FAM228B-203ENST00000469867 ZFHX2Q9C0A1 2572 aaPredicted RBP12.82□□□□□ -0.36
FAM228B-203ENST00000469867 A0A1W2PQ27 194 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 A0A1W2PQ64 194 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 A0A1W2PQD8 194 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 RILPL1Q5EBL4 403 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 RBM43Q6ZSC3 357 aaKnown RBP12.82□□□□□ -0.36
FAM228B-203ENST00000469867 MAEAQ7L5Y9 396 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 CPB2Q96IY4 423 aa12.82□□□□□ -0.36
FAM228B-203ENST00000469867 RSAD1Q9HA92 442 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms