RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 PRKCSHP14314 528 aaPredicted RBP11.34□□□□□ -0.59
THBS3-206ENST00000469769 SELPP16109 830 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 PSMC2P35998 433 aaKnown RBP11.34□□□□□ -0.59
THBS3-206ENST00000469769 ATN1P54259 1190 aaPredicted RBP11.34□□□□□ -0.59
THBS3-206ENST00000469769 TPM4P67936 248 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 CLDN10P78369 228 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 DSC3Q14574 896 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 LPIN1Q14693 890 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 TPD52L1Q16890 204 aaPredicted RBP11.34□□□□□ -0.59
THBS3-206ENST00000469769 EEF1DP3Q658K8 133 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 CATSPER4Q7RTX7 472 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 POMGNT1Q8WZA1 660 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 BICD1Q96G01 975 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 CNOT6LQ96LI5 555 aaKnown RBP11.34□□□□□ -0.59
THBS3-206ENST00000469769 PPP1R16BQ96T49 567 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 CDT1Q9H211 546 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 AGO2Q9UKV8 859 aaKnown RBP11.34□□□□□ -0.59
THBS3-206ENST00000469769 ST3GAL5Q9UNP4 418 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 ALPK3Q96L96 1907 aa11.34□□□□□ -0.59
THBS3-206ENST00000469769 KCNJ18B7U540 433 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 KIAA0355O15063 1070 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 PMM2O15305 246 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 PQBP1O60828 265 aaKnown RBP11.33□□□□□ -0.6
THBS3-206ENST00000469769 RPS6KA5O75582 802 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 CXCL10P02778 98 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 CTSHP09668 335 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 EPB41P11171 864 aaKnown RBP11.33□□□□□ -0.6
THBS3-206ENST00000469769 FGFR4P22455 802 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 FANCCQ00597 558 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 NCBP1Q09161 790 aaKnown RBP11.33□□□□□ -0.6
THBS3-206ENST00000469769 KCNJ12Q14500 433 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 NOLC1Q14978 699 aaKnown RBP eCLIP11.33□□□□□ -0.6
THBS3-206ENST00000469769 KRT31Q15323 416 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 KYAT1Q16773 422 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 DCAF4L1Q3SXM0 396 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 MIIPQ5JXC2 388 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 UBXN11Q5T124 520 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 NOTUMQ6P988 496 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 LRRC8DQ7L1W4 858 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 GPD1LQ8N335 351 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 ZSWIM2Q8NEG5 633 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 EEF2KMTQ96G04 330 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 SCLT1Q96NL6 688 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 TMX1Q9H3N1 280 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 CPSF3Q9UKF6 684 aaKnown RBP11.33□□□□□ -0.6
THBS3-206ENST00000469769 PADI3Q9ULW8 664 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 GINS2Q9Y248 185 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 FRMD4BQ9Y2L6 1034 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 ANK1P16157 1881 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 CITO14578 2027 aa11.33□□□□□ -0.6
THBS3-206ENST00000469769 A0A1B0GTH6 734 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 EXOC3O60645 756 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 ZNF623O75123 536 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 CLTBP09497 229 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 CYP2J2P51589 502 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 PPP2R3AQ06190 1150 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 NR1I3Q14994 352 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 SNRNP35Q16560 246 aaKnown RBP11.32□□□□□ -0.6
THBS3-206ENST00000469769 MAN2A1Q16706 1144 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 ZNF568Q3ZCX4 644 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 PLEKHG4Q58EX7 1191 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 C1orf220Q5T0J3 134 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 SLC27A1Q6PCB7 646 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 INTS8Q75QN2 995 aaKnown RBP11.32□□□□□ -0.6
THBS3-206ENST00000469769 CBWD2Q8IUF1 395 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 FAM186BQ8IYM0 893 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 TMC2Q8TDI7 906 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 PARD3BQ8TEW8 1205 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 VWCEQ96DN2 955 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 CPB2Q96IY4 423 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 TUBGCP2Q9BSJ2 902 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 MSTO1Q9BUK6 570 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 WNT8AQ9H1J5 351 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 HIPK3Q9H422 1215 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 PCIF1Q9H4Z3 704 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 RTN4Q9NQC3 1192 aaKnown RBP11.32□□□□□ -0.6
THBS3-206ENST00000469769 ARMCX3Q9UH62 379 aaPredicted RBP11.32□□□□□ -0.6
THBS3-206ENST00000469769 TRIP11Q15643 1979 aa11.32□□□□□ -0.6
THBS3-206ENST00000469769 ZNF233A6NK53 670 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 NBNO60934 754 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 CLTAP09496 248 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 GHRP10912 638 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 CDK11BP21127 795 aaKnown RBP11.31□□□□□ -0.6
THBS3-206ENST00000469769 CD52P31358 61 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 PBX1P40424 430 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 GRM5P41594 1212 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 COPB1P53618 953 aaKnown RBP11.31□□□□□ -0.6
THBS3-206ENST00000469769 CYP24A1Q07973 514 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 BFSP1Q12934 665 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 PSMD6Q15008 389 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 XKR4Q5GH76 650 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 ZBTB41Q5SVQ8 909 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 CEP135Q66GS9 1140 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 APBB1IPQ7Z5R6 666 aaPredicted RBP11.31□□□□□ -0.6
THBS3-206ENST00000469769 MRPL10Q7Z7H8 261 aaKnown RBP11.31□□□□□ -0.6
THBS3-206ENST00000469769 BRSK2Q8IWQ3 736 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 PLEKHO2Q8TD55 490 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 SLC35C1Q96A29 364 aa11.31□□□□□ -0.6
THBS3-206ENST00000469769 NAP1L5Q96NT1 182 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms