RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 LRRC4CQ9HCJ2 640 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 PPP1R1BQ9UD71 204 aaPredicted RBP15.82■□□□□ 0.12
CBWD3-205ENST00000469687 CNOT7Q9UIV1 285 aaKnown RBP15.82■□□□□ 0.12
CBWD3-205ENST00000469687 ZNF214Q9UL59 606 aaPredicted RBP15.82■□□□□ 0.12
CBWD3-205ENST00000469687 MYO1CO00159 1063 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 RTN2O75298 545 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 PTPRAP18433 802 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 COMTP21964 271 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 IRX5P78411 483 aaPredicted RBP15.82■□□□□ 0.12
CBWD3-205ENST00000469687 TMEM132BQ14DG7 1078 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 TAS1R3Q7RTX0 852 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 SCYL3Q8IZE3 742 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 ZDHHC14Q8IZN3 488 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 ZNF280CQ8ND82 737 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 POMGNT1Q8WZA1 660 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 TATDN2Q93075 761 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 XPNPEP1Q9NQW7 623 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 EXOC7Q9UPT5 735 aa15.82■□□□□ 0.12
CBWD3-205ENST00000469687 PMM2O15305 246 aa15.81■□□□□ 0.12
CBWD3-205ENST00000469687 CLSTN1O94985 981 aa15.81■□□□□ 0.12
CBWD3-205ENST00000469687 HADHBP55084 474 aaKnown RBP15.81■□□□□ 0.12
CBWD3-205ENST00000469687 SNRPFP62306 86 aaKnown RBP15.81■□□□□ 0.12
CBWD3-205ENST00000469687 SAMD3Q8N6K7 520 aa15.81■□□□□ 0.12
CBWD3-205ENST00000469687 UBLCP1Q8WVY7 318 aaPredicted RBP15.81■□□□□ 0.12
CBWD3-205ENST00000469687 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.81■□□□□ 0.12
CBWD3-205ENST00000469687 GPRASP2Q96D09 838 aa15.81■□□□□ 0.12
CBWD3-205ENST00000469687 CENPHQ9H3R5 247 aa15.81■□□□□ 0.12
CBWD3-205ENST00000469687 TMEM8AQ9HCN3 771 aa15.81■□□□□ 0.12
CBWD3-205ENST00000469687 SEPT9Q9UHD8 586 aaPredicted RBP15.81■□□□□ 0.12
CBWD3-205ENST00000469687 UTP11Q9Y3A2 253 aaKnown RBP15.81■□□□□ 0.12
CBWD3-205ENST00000469687 HNRNPDLO14979 420 aaKnown RBP15.8■□□□□ 0.12
CBWD3-205ENST00000469687 CYP11B1P15538 503 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 NR1D1P20393 614 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 CTNNA1P35221 906 aaKnown RBP15.8■□□□□ 0.12
CBWD3-205ENST00000469687 CCT5P48643 541 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 GUCY1A3Q02108 690 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 C11orf63Q6NUN7 778 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 SV2AQ7L0J3 742 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 TMC3Q7Z5M5 1100 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 BCAS4Q8TDM0 211 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 C18orf8Q96DM3 657 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 ATP6V1G3Q96LB4 118 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 FBXL18Q96ME1 805 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 ZSWIM1Q9BR11 485 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 TMBIM4Q9HC24 238 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 DIS3Q9Y2L1 958 aaKnown RBP15.8■□□□□ 0.12
CBWD3-205ENST00000469687 COQ4Q9Y3A0 265 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 PEX10O60683 326 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 GPC3P51654 580 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 MFAP3P55082 362 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 DR1Q01658 176 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 PRKCEQ02156 737 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 CYP24A1Q07973 514 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 ZNF844Q08AG5 666 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 LMBRD2Q68DH5 695 aaPredicted RBP15.8■□□□□ 0.12
CBWD3-205ENST00000469687 KDM7AQ6ZMT4 941 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 ZNF526Q8TF50 670 aaPredicted RBP15.8■□□□□ 0.12
CBWD3-205ENST00000469687 MFSD14AQ96MC6 490 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 SENP7Q9BQF6 1050 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 NTPCRQ9BSD7 190 aaKnown RBP15.8■□□□□ 0.12
CBWD3-205ENST00000469687 PDLIM7Q9NR12 457 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 GINM1Q9NU53 330 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 RAB20Q9NX57 234 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 TRPC6Q9Y210 931 aa15.8■□□□□ 0.12
CBWD3-205ENST00000469687 TCRBV7S2A1N4TA0A589 114 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 DSG3P32926 999 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 PEX5P50542 639 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 WNT7BP56706 349 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 MCCD1P59942 119 aaPredicted RBP15.79■□□□□ 0.12
CBWD3-205ENST00000469687 SP2Q02086 613 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 FSTL1Q12841 308 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 LLGL1Q15334 1064 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 OTUD6AQ7L8S5 288 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 C10orf67Q8IYJ2 551 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 SLC17A8Q8NDX2 589 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 FBXL13Q8NEE6 735 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 RDM1Q8NG50 284 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 ZNF564Q8TBZ8 553 aaPredicted RBP15.79■□□□□ 0.12
CBWD3-205ENST00000469687 DDX1Q92499 740 aaKnown RBP15.79■□□□□ 0.12
CBWD3-205ENST00000469687 KIFAP3Q92845 792 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 VTI1AQ96AJ9 217 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 LRRC45Q96CN5 670 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 FAM213AQ9BRX8 229 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 NUP85Q9BW27 656 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 JPH1Q9HDC5 661 aaPredicted RBP15.79■□□□□ 0.12
CBWD3-205ENST00000469687 A1CFQ9NQ94 594 aaKnown RBP15.79■□□□□ 0.12
CBWD3-205ENST00000469687 MYO1FO00160 1098 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 ZEB2O60315 1214 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 GZMAP12544 262 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 RPS12P25398 132 aaKnown RBP15.79■□□□□ 0.12
CBWD3-205ENST00000469687 HPDP32754 393 aaPredicted RBP15.79■□□□□ 0.12
CBWD3-205ENST00000469687 ACTR2P61160 394 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 TGFB2P61812 414 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 DHX9Q08211 1270 aaKnown RBP15.79■□□□□ 0.12
CBWD3-205ENST00000469687 TCEAL1Q15170 157 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 CYFIP1Q7L576 1253 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 PRELID2Q8N945 189 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 NSUN6Q8TEA1 469 aaKnown RBP15.79■□□□□ 0.12
CBWD3-205ENST00000469687 SPIRE2Q8WWL2 714 aa15.79■□□□□ 0.12
CBWD3-205ENST00000469687 ATP6V0A1Q93050 837 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms