RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 ITGB8P26012 769 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 CD52P31358 61 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 CYP2C18P33260 490 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 YARSP54577 528 aaKnown RBP8.87□□□□□ -0.99
HDAC6-216ENST00000468949 FKBP3Q00688 224 aaKnown RBP8.87□□□□□ -0.99
HDAC6-216ENST00000468949 KCNA1Q09470 495 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 PPIGQ13427 754 aaKnown RBP eCLIP8.87□□□□□ -0.997e-8■■■□□ 17.9
HDAC6-216ENST00000468949 LPIN1Q14693 890 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 KYAT1Q16773 422 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 EDRF1Q3B7T1 1238 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 CCDC40Q4G0X9 1142 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 CEP135Q66GS9 1140 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 SLC27A1Q6PCB7 646 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 MPZL3Q6UWV2 235 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 DEFB128Q7Z7B8 93 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 ZBTB33Q86T24 672 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 USP37Q86T82 979 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 FAM228AQ86W67 206 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 CREBRFQ8IUR6 639 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 CSGALNACT2Q8N6G5 542 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 AOPEPQ8N6M6 819 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 FAM200AQ8TCP9 573 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 TMEM40Q8WWA1 233 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 SCLYQ96I15 445 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 FTHL17Q9BXU8 183 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 FZD8Q9H461 694 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 MINDY3Q9H8M7 445 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 CDHR5Q9HBB8 845 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 AGPAT3Q9NRZ7 376 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 ST3GAL5Q9UNP4 418 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 TNFSF13BQ9Y275 285 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 NOC2LQ9Y3T9 749 aaKnown RBP8.87□□□□□ -0.99
HDAC6-216ENST00000468949 ZMYM2Q9UBW7 1377 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 UMODL1Q5DID0 1318 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 TRIM49BA6NDI0 452 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 SOX1O00570 391 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-216ENST00000468949 CLIC2O15247 247 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 NPTXRO95502 500 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 GNA14O95837 355 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 LDHAP00338 332 aaKnown RBP8.86□□□□□ -0.99
HDAC6-216ENST00000468949 PIGRP01833 764 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 PFKMP08237 780 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 ACTN1P12814 892 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 KRT13P13646 458 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 CDK11BP21127 795 aaKnown RBP8.86□□□□□ -0.99
HDAC6-216ENST00000468949 GARTP22102 1010 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 RAB27AP51159 221 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 ADAM9Q13443 819 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 MFSD5Q6N075 450 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 GPR153Q6NV75 609 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 PSRC1Q6PGN9 363 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-216ENST00000468949 FAM43BQ6ZT52 329 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-216ENST00000468949 TAS1R3Q7RTX0 852 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 RPUSD2Q8IZ73 545 aaKnown RBP8.86□□□□□ -0.99
HDAC6-216ENST00000468949 XXYLT1Q8NBI6 393 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 RNF214Q8ND24 703 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 KCNN1Q92952 543 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 RNPC3Q96LT9 517 aaKnown RBP8.86□□□□□ -0.99
HDAC6-216ENST00000468949 ACO2Q99798 780 aaKnown RBP8.86□□□□□ -0.99
HDAC6-216ENST00000468949 BPIFA3Q9BQP9 254 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 FUCA2Q9BTY2 467 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 CCDC94Q9BW85 323 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-216ENST00000468949 STRA6Q9BX79 667 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 KCTD10Q9H3F6 313 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 PCIF1Q9H4Z3 704 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 PDZD7Q9H5P4 517 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 KIAA1586Q9HCI6 787 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 CHST12Q9NRB3 414 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 HSPBP1Q9NZL4 362 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 AGO2Q9UKV8 859 aaKnown RBP8.86□□□□□ -0.99
HDAC6-216ENST00000468949 PADI3Q9ULW8 664 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 TRAF3IP3Q9Y228 551 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 NFE2L3Q9Y4A8 694 aa8.86□□□□□ -0.99
HDAC6-216ENST00000468949 RANBP2P49792 3224 aaKnown RBP8.86□□□□□ -0.99
HDAC6-216ENST00000468949 EVPLQ92817 2033 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 PES1O00541 588 aaKnown RBP8.85□□□□□ -0.99
HDAC6-216ENST00000468949 IKBKBO14920 756 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 OGTO15294 1046 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 SLC16A3O15427 465 aaKnown RBP8.85□□□□□ -0.99
HDAC6-216ENST00000468949 CLSTN1O94985 981 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 MCF2P10911 925 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 KCNJ6P48051 423 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 SPAG1Q07617 926 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 MCL1Q07820 350 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 MYBPC2Q14324 1141 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 SHHQ15465 462 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 AMHR2Q16671 573 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 C9orf50Q5SZB4 431 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 IER5LQ5T953 404 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 SPATA1Q5VX52 437 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 ANKRD40Q6AI12 368 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 CENPPQ6IPU0 288 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 CNKSR3Q6P9H4 555 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 FOXR2Q6PJQ5 311 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 CDR2LQ86X02 465 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-216ENST00000468949 FAM186BQ8IYM0 893 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 GPD1LQ8N335 351 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 RNF169Q8NCN4 708 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 ENOX1Q8TC92 643 aaKnown RBP8.85□□□□□ -0.99
HDAC6-216ENST00000468949 SAAL1Q96ER3 474 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms