RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 NDUFS2O75306 463 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 CDK17Q00537 523 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 PTH1RQ03431 593 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 MBNL2Q5VZF2 373 aaKnown RBP6.65□□□□□ -1.34
LSM5-209ENST00000468872 IGFL4Q6B9Z1 124 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 EPM2AIP1Q7L775 607 aaPredicted RBP6.65□□□□□ -1.34
LSM5-209ENST00000468872 OR14C36Q8NHC7 312 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 RSAD2Q8WXG1 361 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 GCDHQ92947 438 aaPredicted RBP6.65□□□□□ -1.34
LSM5-209ENST00000468872 NKD2Q969F2 451 aaPredicted RBP6.65□□□□□ -1.34
LSM5-209ENST00000468872 ANLNQ9NQW6 1124 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 SLC52A1Q9NWF4 448 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 PCDHB6Q9Y5E3 794 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 RBM8AQ9Y5S9 174 aaKnown RBP6.65□□□□□ -1.34
LSM5-209ENST00000468872 CDY2AQ9Y6F7 541 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 CAPN14A8MX76 684 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 C1SP09871 688 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 LPOP22079 712 aaPredicted RBP6.64□□□□□ -1.35
LSM5-209ENST00000468872 CYP2C19P33261 490 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 GNALP38405 381 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 SLC5A3P53794 718 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 CCT2P78371 535 aaKnown RBP6.64□□□□□ -1.35
LSM5-209ENST00000468872 SPIDRQ14159 915 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 RRP12Q5JTH9 1297 aaKnown RBP6.64□□□□□ -1.35
LSM5-209ENST00000468872 SPTY2D1Q68D10 685 aaPredicted RBP6.64□□□□□ -1.35
LSM5-209ENST00000468872 GAREM2Q75VX8 874 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 ANKRD53Q8N9V6 530 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 GAB3Q8WWW8 586 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 PLEKHG4BQ96PX9 1271 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 NOL10Q9BSC4 688 aaKnown RBP6.64□□□□□ -1.35
LSM5-209ENST00000468872 HAPLN2Q9GZV7 340 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.64□□□□□ -1.35
LSM5-209ENST00000468872 HECAQ9UBI9 543 aaPredicted RBP6.64□□□□□ -1.35
LSM5-209ENST00000468872 EVLQ9UI08 416 aaPredicted RBP6.64□□□□□ -1.35
LSM5-209ENST00000468872 SERPINB13Q9UIV8 391 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 ING1Q9UK53 422 aaPredicted RBP6.64□□□□□ -1.35
LSM5-209ENST00000468872 SH3BP1Q9Y3L3 701 aa6.64□□□□□ -1.35
LSM5-209ENST00000468872 GOLGA6CA6NDK9 693 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 GOLGA6BA6NDN3 693 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 GOLGA6DP0CG33 693 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 VCAM1P19320 739 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 ADKP55263 362 aaKnown RBP6.63□□□□□ -1.35
LSM5-209ENST00000468872 BPIFB4P59827 614 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 ADAM8P78325 824 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 GFOD2Q3B7J2 385 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 LSM12Q3MHD2 195 aaKnown RBP6.63□□□□□ -1.35
LSM5-209ENST00000468872 BMP8AQ7Z5Y6 402 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 PPM1NQ8N819 430 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 CDYL2Q8N8U2 506 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 CACTINQ8WUQ7 758 aaKnown RBP6.63□□□□□ -1.35
LSM5-209ENST00000468872 CLIP3Q96DZ5 547 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 DYDC2Q96IM9 177 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 RPL10LQ96L21 214 aaKnown RBP6.63□□□□□ -1.35
LSM5-209ENST00000468872 LRGUKQ96M69 825 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 AIFM3Q96NN9 605 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 GPHA2Q96T91 129 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 MPHOSPH9Q99550 1183 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 ACE2Q9BYF1 805 aaPredicted RBP6.63□□□□□ -1.35
LSM5-209ENST00000468872 POLR3BQ9NW08 1133 aaPredicted RBP6.63□□□□□ -1.35
LSM5-209ENST00000468872 AURKAIP1Q9NWT8 199 aaPredicted RBP6.63□□□□□ -1.35
LSM5-209ENST00000468872 GOLGA6AQ9NYA3 693 aa6.63□□□□□ -1.35
LSM5-209ENST00000468872 A0A0A6YYK5 440 aaPredicted RBP6.62□□□□□ -1.35
LSM5-209ENST00000468872 CCDC194A0A1B0GVG4 234 aa6.62□□□□□ -1.35
LSM5-209ENST00000468872 VSTM5A8MXK1 200 aa6.62□□□□□ -1.35
LSM5-209ENST00000468872 SUV39H1O43463 412 aa6.62□□□□□ -1.35
LSM5-209ENST00000468872 NARSO43776 548 aaKnown RBP6.62□□□□□ -1.35
LSM5-209ENST00000468872 ZNF202O95125 648 aa6.62□□□□□ -1.35
LSM5-209ENST00000468872 U2AF1L5P0DN76 240 aaPredicted RBP6.62□□□□□ -1.35
LSM5-209ENST00000468872 GPR15P49685 360 aa6.62□□□□□ -1.35
LSM5-209ENST00000468872 U2AF1Q01081 240 aaKnown RBP eCLIP6.62□□□□□ -1.35
LSM5-209ENST00000468872 KIF23Q02241 960 aaPredicted RBP6.62□□□□□ -1.35
LSM5-209ENST00000468872 GTF2H3Q13889 308 aa6.62□□□□□ -1.35
LSM5-209ENST00000468872 ANO4Q32M45 955 aa6.62□□□□□ -1.35
LSM5-209ENST00000468872 THEMISQ8N1K5 641 aaPredicted RBP6.62□□□□□ -1.35
LSM5-209ENST00000468872 WDR92Q96MX6 357 aa6.62□□□□□ -1.35
LSM5-209ENST00000468872 FDXACB1Q9BRP7 624 aaPredicted RBP6.62□□□□□ -1.35
LSM5-209ENST00000468872 SOX7Q9BT81 388 aa6.62□□□□□ -1.35
LSM5-209ENST00000468872 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 MAFGO15525 162 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 CYP27B1O15528 508 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 SEC24DO94855 1032 aaPredicted RBP6.61□□□□□ -1.35
LSM5-209ENST00000468872 AKAP5P24588 427 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 ABHD18Q0P651 414 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 ADRM1Q16186 407 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 MINDY4Q4G0A6 757 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 CCDC178Q5BJE1 867 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 B3GNT9Q6UX72 402 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 CATIPQ7Z7H3 387 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 CLEC14AQ86T13 490 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 CCDC146Q8IYE0 955 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 MIER2Q8N344 545 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 COA7Q96BR5 231 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 HIST1H2AHQ96KK5 128 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 HIST1H2AJQ99878 128 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 SLC12A5Q9H2X9 1139 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 ZNF703Q9H7S9 590 aaPredicted RBP6.61□□□□□ -1.35
LSM5-209ENST00000468872 OBP2AQ9NY56 170 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 CEP72Q9P209 647 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 DNAI1Q9UI46 699 aa6.61□□□□□ -1.35
LSM5-209ENST00000468872 MAP4K4O95819 1239 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms