RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 C6orf222P0C671 652 aaPredicted RBP20.59■□□□□ 0.89
SMC4-209ENST00000468653 DLATP10515 647 aaKnown RBP20.59■□□□□ 0.89
SMC4-209ENST00000468653 HOXD10P28358 340 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 MBTD1Q05BQ5 628 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 GPIHBP1Q8IV16 184 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 ACRBPQ8NEB7 543 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 NLRP7Q8WX94 980 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 POP1Q99575 1024 aaKnown RBP20.59■□□□□ 0.89
SMC4-209ENST00000468653 KATNAL1Q9BW62 490 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 KAT6AQ92794 2004 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 PMM2O15305 246 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 GTF2H1P32780 548 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 VEGFBP49765 207 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 CAP1Q01518 475 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 PSMD6Q15008 389 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 ZBTB33Q86T24 672 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 KIAA0319LQ8IZA0 1049 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 FNBP1Q96RU3 617 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 DEF6Q9H4E7 631 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 IFT122Q9HBG6 1241 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 SPC25Q9HBM1 224 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 TMEM8AQ9HCN3 771 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 PRMT7Q9NVM4 692 aaPredicted RBP20.59■□□□□ 0.89
SMC4-209ENST00000468653 MYO6Q9UM54 1294 aa20.59■□□□□ 0.89
SMC4-209ENST00000468653 KIF2AO00139 706 aaPredicted RBP20.58■□□□□ 0.89
SMC4-209ENST00000468653 HAS3O00219 553 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 ZEB2O60315 1214 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 IPO7O95373 1038 aaKnown RBP20.58■□□□□ 0.89
SMC4-209ENST00000468653 MAP2K1Q02750 393 aaPredicted RBP20.58■□□□□ 0.89
SMC4-209ENST00000468653 TRIM32Q13049 653 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 ASIC2Q16515 512 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 SLC9C1Q4G0N8 1177 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 EPC2Q52LR7 807 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 ATF7IP2Q5U623 682 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 KRT39Q6A163 491 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 IQCEQ6IPM2 695 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 GJB7Q6PEY0 223 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 CRELD2Q6UXH1 353 aaPredicted RBP20.58■□□□□ 0.89
SMC4-209ENST00000468653 IFNLR1Q8IU57 520 aaPredicted RBP20.58■□□□□ 0.89
SMC4-209ENST00000468653 CD99L2Q8TCZ2 262 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 PPP1R13LQ8WUF5 828 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 MINDY3Q9H8M7 445 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 RBAKQ9NYW8 714 aaPredicted RBP20.58■□□□□ 0.89
SMC4-209ENST00000468653 AIPL1Q9NZN9 384 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 ARHGAP20Q9P2F6 1191 aa20.58■□□□□ 0.89
SMC4-209ENST00000468653 SEPT4O43236 478 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 KPNA6O60684 536 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 SERPING1P05155 500 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 PLEKP08567 350 aaPredicted RBP20.57■□□□□ 0.88
SMC4-209ENST00000468653 EIF4A3P38919 411 aaKnown RBP20.57■□□□□ 0.88
SMC4-209ENST00000468653 GJA9P57773 515 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 CACNB2Q08289 660 aaPredicted RBP20.57■□□□□ 0.88
SMC4-209ENST00000468653 TDRD12Q587J7 1177 aaKnown RBP20.57■□□□□ 0.88
SMC4-209ENST00000468653 GNASQ5JWF2 1037 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 TSHZ1Q6ZSZ6 1077 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 LMO3Q8TAP4 145 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 TOPORSQ9NS56 1045 aaPredicted RBP20.57■□□□□ 0.88
SMC4-209ENST00000468653 APEX2Q9UBZ4 518 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 DAAM1Q9Y4D1 1078 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 B4GALT5O43286 388 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 RARBP10826 455 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 KRT83P78385 493 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 PURAQ00577 322 aaKnown RBP20.57■□□□□ 0.88
SMC4-209ENST00000468653 ARID5AQ03989 594 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 MCL1Q07820 350 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 ZBTB41Q5SVQ8 909 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 MPZL3Q6UWV2 235 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 ZNF592Q92610 1267 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 FAM49AQ9H0Q0 323 aaPredicted RBP20.57■□□□□ 0.88
SMC4-209ENST00000468653 SRRDQ9UH36 339 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 DNAJC12Q9UKB3 198 aa20.57■□□□□ 0.88
SMC4-209ENST00000468653 MYADML2A6NDP7 307 aa20.56■□□□□ 0.88
SMC4-209ENST00000468653 EIF3CLB5ME19 914 aaKnown RBP20.56■□□□□ 0.88
SMC4-209ENST00000468653 CYP2C9P11712 490 aa20.56■□□□□ 0.88
SMC4-209ENST00000468653 ELNP15502 786 aa20.56■□□□□ 0.88
SMC4-209ENST00000468653 GPC3P51654 580 aa20.56■□□□□ 0.88
SMC4-209ENST00000468653 KLHL30Q0D2K2 578 aa20.56■□□□□ 0.88
SMC4-209ENST00000468653 FAM187BQ17R55 369 aa20.56■□□□□ 0.88
SMC4-209ENST00000468653 ZNF410Q86VK4 478 aa20.56■□□□□ 0.88
SMC4-209ENST00000468653 EIF3CQ99613 913 aaKnown RBP20.56■□□□□ 0.88
SMC4-209ENST00000468653 STK33Q9BYT3 514 aa20.56■□□□□ 0.88
SMC4-209ENST00000468653 PDE11AQ9HCR9 933 aa20.56■□□□□ 0.88
SMC4-209ENST00000468653 AJAP1Q9UKB5 411 aaPredicted RBP20.56■□□□□ 0.88
SMC4-209ENST00000468653 SMIM35A0A1B0GVV1 85 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 SSU72P8A0A1W2PR75 194 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 MBLAC1A4D2B0 266 aaPredicted RBP20.55■□□□□ 0.88
SMC4-209ENST00000468653 OGTO15294 1046 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 AKR1B10O60218 316 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 CSDE1O75534 798 aaKnown RBP20.55■□□□□ 0.88
SMC4-209ENST00000468653 PGK1P00558 417 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 TUBB4AP04350 444 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 IQCF3P0C7M6 154 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 TNNI1P19237 187 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 RFX1P22670 979 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 JAM2P57087 298 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 CDC42EP1Q00587 391 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 SPA17Q15506 151 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 ENOX2Q16206 610 aaKnown RBP20.55■□□□□ 0.88
SMC4-209ENST00000468653 ZNF568Q3ZCX4 644 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 SEZ6Q53EL9 994 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms