RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 PLIN2Q99541 437 aa16.08■□□□□ 0.16
COMMD3-206ENST00000468179 POP1Q99575 1024 aaKnown RBP16.08■□□□□ 0.16
COMMD3-206ENST00000468179 COLEC11Q9BWP8 271 aa16.08■□□□□ 0.16
COMMD3-206ENST00000468179 MRPL4Q9BYD3 311 aaKnown RBP16.08■□□□□ 0.16
COMMD3-206ENST00000468179 PDZD7Q9H5P4 517 aa16.08■□□□□ 0.16
COMMD3-206ENST00000468179 LARSQ9P2J5 1176 aaKnown RBP16.08■□□□□ 0.16
COMMD3-206ENST00000468179 DNAJB4Q9UDY4 337 aa16.08■□□□□ 0.16
COMMD3-206ENST00000468179 CCDC39Q9UFE4 941 aa16.08■□□□□ 0.16
COMMD3-206ENST00000468179 PCDHGC5Q9Y5F6 944 aa16.08■□□□□ 0.16
COMMD3-206ENST00000468179 KIAA1671Q9BY89 1806 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 NRP1O14786 923 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 LINC01565O15544 149 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 CTSAP10619 480 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 PLS3P13797 630 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 AKAP5P24588 427 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 OR1G1P47890 313 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 SCNN1GP51170 649 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 SLC12A3P55017 1021 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 STRN3Q13033 797 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 TMEM184AQ6ZMB5 413 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 CDR2LQ86X02 465 aaPredicted RBP16.07■□□□□ 0.16
COMMD3-206ENST00000468179 FAM178BQ8IXR5 827 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 COLGALT2Q8IYK4 626 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 CASP10Q92851 521 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 KIFC3Q9BVG8 833 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 ZBP1Q9H171 429 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 POLD4Q9HCU8 107 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 ODF2LQ9ULJ1 636 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 MTMR6Q9Y217 621 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 TNFSF13BQ9Y275 285 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 IRAK3Q9Y616 596 aa16.07■□□□□ 0.16
COMMD3-206ENST00000468179 C2orf71A6NGG8 1288 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 HIDE1A8MVS5 230 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 MBTPS2O43462 519 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 TBX10O75333 385 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 IL9P15248 144 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 HOXB8P17481 243 aaPredicted RBP16.06■□□□□ 0.16
COMMD3-206ENST00000468179 ABCD1P33897 745 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 AFF1P51825 1210 aaKnown RBP16.06■□□□□ 0.16
COMMD3-206ENST00000468179 DLX2Q07687 328 aaPredicted RBP16.06■□□□□ 0.16
COMMD3-206ENST00000468179 DSC1Q08554 894 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 PPFIBP1Q86W92 1011 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 DAW1Q8N136 415 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 MSLNLQ96KJ4 702 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 ZFP42Q96MM3 310 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 NECAB3Q96P71 396 aaPredicted RBP16.06■□□□□ 0.16
COMMD3-206ENST00000468179 EMILIN2Q9BXX0 1053 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 CCSER1Q9C0I3 900 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 CLEC1BQ9P126 229 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 ARHGAP28Q9P2N2 729 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 SRPRBQ9Y5M8 271 aaKnown RBP16.06■□□□□ 0.16
COMMD3-206ENST00000468179 CLIC4Q9Y696 253 aa16.06■□□□□ 0.16
COMMD3-206ENST00000468179 MORC2Q9Y6X9 1032 aaPredicted RBP16.06■□□□□ 0.16
COMMD3-206ENST00000468179 EYSQ5T1H1 3165 aa16.05■□□□□ 0.16
COMMD3-206ENST00000468179 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.05■□□□□ 0.16
COMMD3-206ENST00000468179 KRT18P05783 430 aaKnown RBP16.05■□□□□ 0.16
COMMD3-206ENST00000468179 THP07101 528 aa16.05■□□□□ 0.16
COMMD3-206ENST00000468179 SSTR3P32745 418 aaPredicted RBP16.05■□□□□ 0.16
COMMD3-206ENST00000468179 YARSP54577 528 aaKnown RBP16.05■□□□□ 0.16
COMMD3-206ENST00000468179 MAPK7Q13164 816 aa16.05■□□□□ 0.16
COMMD3-206ENST00000468179 PTPAQ15257 358 aa16.05■□□□□ 0.16
COMMD3-206ENST00000468179 SMAD2Q15796 467 aaKnown RBP16.05■□□□□ 0.16
COMMD3-206ENST00000468179 CLUL1Q15846 466 aa16.05■□□□□ 0.16
COMMD3-206ENST00000468179 TPRNQ4KMQ1 711 aa16.05■□□□□ 0.16
COMMD3-206ENST00000468179 NT5DC1Q5TFE4 455 aa16.05■□□□□ 0.16
COMMD3-206ENST00000468179 TMEM173Q86WV6 379 aaPredicted RBP16.05■□□□□ 0.16
COMMD3-206ENST00000468179 GJD3Q8N144 294 aa16.05■□□□□ 0.16
COMMD3-206ENST00000468179 ZNF396Q96N95 335 aaPredicted RBP16.05■□□□□ 0.16
COMMD3-206ENST00000468179 TCHPQ9BT92 498 aa16.05■□□□□ 0.16
COMMD3-206ENST00000468179 CCDC94Q9BW85 323 aaPredicted RBP16.05■□□□□ 0.16
COMMD3-206ENST00000468179 MRPL17Q9NRX2 175 aaKnown RBP16.05■□□□□ 0.16
COMMD3-206ENST00000468179 SNTG2Q9NY99 539 aa16.05■□□□□ 0.16
COMMD3-206ENST00000468179 KLK14Q9P0G3 267 aa16.05■□□□□ 0.16
COMMD3-206ENST00000468179 SFI1A8K8P3 1242 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 SLC16A4O15374 487 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 GLP2RO95838 553 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 SOD2P04179 222 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 URODP06132 367 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 PLCG1P19174 1290 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 MARCKSP29966 332 aaPredicted RBP16.04■□□□□ 0.16
COMMD3-206ENST00000468179 DDIT3P35638 169 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 RAD51AP2Q09MP3 1159 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 TUSC3Q13454 348 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 SLC39A14Q15043 492 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 GPBP1Q86WP2 473 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 ADHFE1Q8IWW8 467 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 SMRP1Q8NCR6 262 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 RAD54LQ92698 747 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 ACO2Q99798 780 aaKnown RBP16.04■□□□□ 0.16
COMMD3-206ENST00000468179 TOPORSQ9NS56 1045 aaPredicted RBP16.04■□□□□ 0.16
COMMD3-206ENST00000468179 MIOSQ9NXC5 875 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 BARX2Q9UMQ3 279 aaPredicted RBP16.04■□□□□ 0.16
COMMD3-206ENST00000468179 PRG3Q9Y2Y8 225 aaPredicted RBP16.04■□□□□ 0.16
COMMD3-206ENST00000468179 PLXNA4Q9HCM2 1894 aa16.04■□□□□ 0.16
COMMD3-206ENST00000468179 UNC80Q8N2C7 3258 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 TTLL13PA6NNM8 815 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 CLASP2O75122 1294 aaKnown RBP16.03■□□□□ 0.16
COMMD3-206ENST00000468179 RECQL4O94761 1208 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 FAM13AO94988 1023 aa16.03■□□□□ 0.16
COMMD3-206ENST00000468179 CEBPZQ03701 1054 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms