RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 SPATA31C1P0DKV0 1188 aa23.36■■□□□ 1.33
COL9A3-207ENST00000467819 MYBP10242 640 aa23.36■■□□□ 1.33
COL9A3-207ENST00000467819 GLUD2P49448 558 aa23.36■■□□□ 1.33
COL9A3-207ENST00000467819 SLC27A1Q6PCB7 646 aa23.36■■□□□ 1.33
COL9A3-207ENST00000467819 ACSF2Q96CM8 615 aaPredicted RBP23.36■■□□□ 1.33
COL9A3-207ENST00000467819 FAM86C1Q9NVL1 165 aa23.36■■□□□ 1.33
COL9A3-207ENST00000467819 KLK14Q9P0G3 267 aa23.36■■□□□ 1.33
COL9A3-207ENST00000467819 SSX2IPQ9Y2D8 614 aa23.36■■□□□ 1.33
COL9A3-207ENST00000467819 TEX28O15482 410 aa23.35■■□□□ 1.33
COL9A3-207ENST00000467819 MED24O75448 989 aa23.35■■□□□ 1.33
COL9A3-207ENST00000467819 ADH1AP07327 375 aa23.35■■□□□ 1.33
COL9A3-207ENST00000467819 SAFBQ15424 915 aaKnown RBP eCLIP23.35■■□□□ 1.33
COL9A3-207ENST00000467819 RNF168Q8IYW5 571 aaPredicted RBP23.35■■□□□ 1.33
COL9A3-207ENST00000467819 PARP2Q9UGN5 583 aa23.35■■□□□ 1.33
COL9A3-207ENST00000467819 USP34Q70CQ2 3546 aa23.34■■□□□ 1.33
COL9A3-207ENST00000467819 XRCC6P12956 609 aaKnown RBP eCLIP23.34■■□□□ 1.33
COL9A3-207ENST00000467819 KIAA0319Q5VV43 1072 aa23.34■■□□□ 1.33
COL9A3-207ENST00000467819 OTOP3Q7RTS5 596 aa23.34■■□□□ 1.33
COL9A3-207ENST00000467819 CATSPER3Q86XQ3 398 aa23.34■■□□□ 1.33
COL9A3-207ENST00000467819 CCDC83Q8IWF9 413 aa23.34■■□□□ 1.33
COL9A3-207ENST00000467819 B3GALT6Q96L58 329 aa23.34■■□□□ 1.33
COL9A3-207ENST00000467819 COLEC11Q9BWP8 271 aa23.34■■□□□ 1.33
COL9A3-207ENST00000467819 TUFT1Q9NNX1 390 aa23.34■■□□□ 1.33
COL9A3-207ENST00000467819 DOCK8Q8NF50 2099 aa23.34■■□□□ 1.33
COL9A3-207ENST00000467819 A0A1B0GUA9 196 aa23.33■■□□□ 1.33
COL9A3-207ENST00000467819 SEC24BO95487 1268 aa23.33■■□□□ 1.33
COL9A3-207ENST00000467819 EFEMP2O95967 443 aa23.33■■□□□ 1.33
COL9A3-207ENST00000467819 GLUD1P00367 558 aa23.33■■□□□ 1.33
COL9A3-207ENST00000467819 POTEGQ6S5H5 508 aa23.33■■□□□ 1.33
COL9A3-207ENST00000467819 C15orf39Q6ZRI6 1047 aa23.33■■□□□ 1.33
COL9A3-207ENST00000467819 GSTCDQ8NEC7 633 aa23.33■■□□□ 1.33
COL9A3-207ENST00000467819 MCPH1Q8NEM0 835 aa23.33■■□□□ 1.33
COL9A3-207ENST00000467819 RABGGTAQ92696 567 aa23.33■■□□□ 1.33
COL9A3-207ENST00000467819 TRIP11Q15643 1979 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 DSG1Q02413 1049 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 GRIK3Q13003 919 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 ZNF174Q15697 407 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 FUT10Q6P4F1 479 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 GLYCTKQ8IVS8 523 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 ZBTB8OSQ8IWT0 167 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 C8orf76Q96K31 380 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 NACC1Q96RE7 527 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 GPR62Q9BZJ7 368 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 RXFP1Q9HBX9 757 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 PRMT7Q9NVM4 692 aaPredicted RBP23.32■■□□□ 1.32
COL9A3-207ENST00000467819 CACNG4Q9UBN1 327 aa23.32■■□□□ 1.32
COL9A3-207ENST00000467819 CCDC195A0A1B0GUA6 201 aa23.31■■□□□ 1.32
COL9A3-207ENST00000467819 EIF5BO60841 1220 aaKnown RBP23.31■■□□□ 1.32
COL9A3-207ENST00000467819 SPATA31D3P0C874 917 aa23.31■■□□□ 1.32
COL9A3-207ENST00000467819 TMEM132AQ24JP5 1023 aa23.31■■□□□ 1.32
COL9A3-207ENST00000467819 CDCA2Q69YH5 1023 aaPredicted RBP23.31■■□□□ 1.32
COL9A3-207ENST00000467819 ELMSAN1Q6PJG2 1045 aa23.31■■□□□ 1.32
COL9A3-207ENST00000467819 PPP4R3CPQ6ZMV5 832 aa23.31■■□□□ 1.32
COL9A3-207ENST00000467819 SPATA31D4Q6ZUB0 917 aa23.31■■□□□ 1.32
COL9A3-207ENST00000467819 PALB2Q86YC2 1186 aa23.31■■□□□ 1.32
COL9A3-207ENST00000467819 CMASQ8NFW8 434 aaPredicted RBP23.31■■□□□ 1.32
COL9A3-207ENST00000467819 PRIMPOLQ96LW4 560 aa23.31■■□□□ 1.32
COL9A3-207ENST00000467819 POLR3CQ9BUI4 534 aaPredicted RBP23.31■■□□□ 1.32
COL9A3-207ENST00000467819 MFSD1Q9H3U5 465 aa23.31■■□□□ 1.32
COL9A3-207ENST00000467819 CHST7Q9NS84 486 aa23.31■■□□□ 1.32
COL9A3-207ENST00000467819 ADAM28Q9UKQ2 775 aa23.31■■□□□ 1.32
COL9A3-207ENST00000467819 DOCK6Q96HP0 2047 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 TTLL13PA6NNM8 815 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 H0Y858 1186 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 RFPL2O75678 378 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 OR52Z1P0C646 297 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 LIG1P18858 919 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 USP41Q3LFD5 358 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 TMEM105Q8N8V8 129 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 ERMNQ8TAM6 284 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 RIN2Q8WYP3 895 aaPredicted RBP23.3■■□□□ 1.32
COL9A3-207ENST00000467819 BSNDQ8WZ55 320 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 ATOH1Q92858 354 aaPredicted RBP23.3■■□□□ 1.32
COL9A3-207ENST00000467819 DPP7Q9UHL4 492 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 LIMCH1Q9UPQ0 1083 aa23.3■■□□□ 1.32
COL9A3-207ENST00000467819 ZMYM2Q9UBW7 1377 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 ZFHX2Q9C0A1 2572 aaPredicted RBP23.29■■□□□ 1.32
COL9A3-207ENST00000467819 ARHGEF35A5YM69 484 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 TADA2AO75478 443 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 HASPINQ8TF76 798 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 SMG7Q92540 1137 aaKnown RBP23.29■■□□□ 1.32
COL9A3-207ENST00000467819 PAAF1Q9BRP4 392 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 C2orf40Q9H1Z8 148 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 FZD8Q9H461 694 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 PDZD7Q9H5P4 517 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 KCNK12Q9HB15 430 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 USP20Q9Y2K6 914 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 VWA8A3KMH1 1905 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 CLUHO75153 1309 aa23.29■■□□□ 1.32
COL9A3-207ENST00000467819 MYO15AQ9UKN7 3530 aa23.28■■□□□ 1.32
COL9A3-207ENST00000467819 N4BP3O15049 544 aa23.28■■□□□ 1.32
COL9A3-207ENST00000467819 GALR2O43603 387 aaPredicted RBP23.28■■□□□ 1.32
COL9A3-207ENST00000467819 N4BP1O75113 896 aaKnown RBP23.28■■□□□ 1.32
COL9A3-207ENST00000467819 PRKCBP05771 671 aa23.28■■□□□ 1.32
COL9A3-207ENST00000467819 RPL17P18621 184 aaKnown RBP23.28■■□□□ 1.32
COL9A3-207ENST00000467819 RPA1P27694 616 aa23.28■■□□□ 1.32
COL9A3-207ENST00000467819 GBP2P32456 591 aaPredicted RBP23.28■■□□□ 1.32
COL9A3-207ENST00000467819 TDGQ13569 410 aa23.28■■□□□ 1.32
COL9A3-207ENST00000467819 GNL2Q13823 731 aaKnown RBP23.28■■□□□ 1.32
COL9A3-207ENST00000467819 FAM187BQ17R55 369 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms