RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SCAND2PQ9GZW5 306 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-203ENST00000466732 GREM2Q9H772 168 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 TRPS1Q9UHF7 1281 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 HDAC5Q9UQL6 1122 aa5.34□□□□□ -1.55
VPS13D-203ENST00000466732 AKAP8O43823 692 aaKnown RBP5.33□□□□□ -1.56
VPS13D-203ENST00000466732 HSP90B1P14625 803 aaKnown RBP5.33□□□□□ -1.56
VPS13D-203ENST00000466732 CDK11BP21127 795 aaKnown RBP5.33□□□□□ -1.56
VPS13D-203ENST00000466732 ACVRL1P37023 503 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 GDF5P43026 501 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 SLC25A3Q00325 362 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 PPP3CAQ08209 521 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 VPS72Q15906 364 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 PRAMEF14Q5SWL7 426 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 MBNL2Q5VZF2 373 aaKnown RBP5.33□□□□□ -1.56
VPS13D-203ENST00000466732 ANKS6Q68DC2 871 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 Q6ZVL8 140 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 PDZD4Q76G19 769 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-203ENST00000466732 GPRIN1Q7Z2K8 1008 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 CEP95Q96GE4 821 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 DMRT3Q9NQL9 472 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 RBM12Q9NTZ6 932 aaKnown RBP5.33□□□□□ -1.56
VPS13D-203ENST00000466732 GPR45Q9Y5Y3 372 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 HS3ST3A1Q9Y663 406 aa5.33□□□□□ -1.56
VPS13D-203ENST00000466732 TRIM75PA6NK02 468 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 GRXCR1A8MXD5 290 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 PRR5-ARHGAP8B1AHC4 643 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 NARSO43776 548 aaKnown RBP5.32□□□□□ -1.56
VPS13D-203ENST00000466732 FAM20BO75063 409 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 ZNF202O95125 648 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 AGXTP21549 392 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 ECHS1P30084 290 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 MCAMP43121 646 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 GUCY2FP51841 1108 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 MALLQ13021 153 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 CSRP2Q16527 193 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 INAVAQ3KP66 663 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 RABL3Q5HYI8 236 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 GJC2Q5T442 439 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-203ENST00000466732 FNDC7Q5VTL7 733 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 FAM180AQ6UWF9 173 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 USP51Q70EK9 711 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 AMOTL1Q8IY63 956 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 CBARPQ8N350 705 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-203ENST00000466732 REPS2Q8NFH8 660 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 OR7D4Q8NG98 312 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 ADI1Q9BV57 179 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 BCO1Q9HAY6 547 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 ZNF277Q9NRM2 450 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-203ENST00000466732 ZBTB21Q9ULJ3 1066 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 PCDHGA2Q9Y5H1 932 aa5.32□□□□□ -1.56
VPS13D-203ENST00000466732 B5MCH6 92 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 PEX11BO96011 259 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 GSPT1P15170 499 aaKnown RBP5.31□□□□□ -1.56
VPS13D-203ENST00000466732 PTPN7P35236 360 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 IARSP41252 1262 aaKnown RBP5.31□□□□□ -1.56
VPS13D-203ENST00000466732 FLT3LGP49771 235 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 MTMR1Q13613 665 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 NOMO1Q15155 1222 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 MFSD14BQ5SR56 506 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 TRMT2AQ8IZ69 625 aaKnown RBP5.31□□□□□ -1.56
VPS13D-203ENST00000466732 PRPF38AQ8NAV1 312 aaKnown RBP5.31□□□□□ -1.56
VPS13D-203ENST00000466732 C1orf162Q8NEQ5 155 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-203ENST00000466732 HOXB13Q92826 284 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-203ENST00000466732 SLC2A13Q96QE2 648 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 NDC1Q9BTX1 674 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 SPON1Q9HCB6 807 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 SLC2A4RGQ9NR83 387 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 SRRDQ9UH36 339 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 SORCS3Q9UPU3 1222 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 CLCA2Q9UQC9 943 aa5.31□□□□□ -1.56
VPS13D-203ENST00000466732 TBKBP1A7MCY6 615 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 CYR61O00622 381 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 MT-CO1P00395 513 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 SREBF1P36956 1147 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 PTTG1IPP53801 180 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 EVA1CP58658 441 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 FAM50AQ14320 339 aaKnown RBP5.3□□□□□ -1.56
VPS13D-203ENST00000466732 CLUL1Q15846 466 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 BMT2Q1RMZ1 405 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 FAM47AQ5JRC9 791 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 SYDE2Q5VT97 1194 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 PGM2L1Q6PCE3 622 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 ZNF572Q7Z3I7 529 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-203ENST00000466732 FBXO18Q8NFZ0 1043 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 ZNF483Q8TF39 744 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-203ENST00000466732 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 CCDC8Q9H0W5 538 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-203ENST00000466732 KCNH6Q9H252 994 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 MMRN2Q9H8L6 949 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 TRHDEQ9UKU6 1024 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 COL4A3BPQ9Y5P4 624 aa5.3□□□□□ -1.56
VPS13D-203ENST00000466732 WNT10BO00744 389 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 TRIM24O15164 1050 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 KATNA1O75449 491 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 RPS6KA4O75676 772 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 APOBEC3AP31941 199 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-203ENST00000466732 PER3P56645 1201 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 ITKQ08881 620 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 ABHD18Q0P651 414 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 MGAT2Q10469 447 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms