RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 IGLV3-22A0A075B6J6 115 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 XYLBO75191 536 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 ZNF806P0C7X5 589 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 ANTXR2P58335 489 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 SATB1Q01826 763 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 PRKCEQ02156 737 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 DSC1Q08554 894 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 AP3B2Q13367 1082 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 USP41Q3LFD5 358 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 PPM1LQ5SGD2 360 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 LONP2Q86WA8 852 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 B3GALT6Q96L58 329 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 RXFP3Q9NSD7 469 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 AGPAT5Q9NUQ2 364 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 KCNH3Q9ULD8 1083 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 SAMM50Q9Y512 469 aa16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 DSPP15924 2871 aaKnown RBP16.53■□□□□ 0.24
HMGXB4-206ENST00000466438 F5P12259 2224 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 F8W810 466 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 TAF4O00268 1085 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 NR1I2O75469 434 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 CYP21A2P08686 494 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 RPL17P18621 184 aaKnown RBP16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 BMP2KLQ5H9B9 411 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 CEP68Q76N32 757 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 PLA2G2FQ9BZM2 168 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 OSBPL3Q9H4L5 887 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 LMAN1LQ9HAT1 526 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 POLIQ9UNA4 740 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 WASF3Q9UPY6 502 aa16.52■□□□□ 0.24
HMGXB4-206ENST00000466438 FLNBO75369 2602 aaKnown RBP16.52■□□□□ 0.23
HMGXB4-206ENST00000466438 WDR81Q562E7 1941 aa16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 CCL16O15467 120 aa16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 C8AP07357 584 aa16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 POU2F2P09086 479 aa16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 SETQ01105 290 aaPredicted RBP16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 FOXC1Q12948 553 aa16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 TARBP2Q15633 366 aaKnown RBP16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 PPP1R18Q6NYC8 613 aa16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 FUT10Q6P4F1 479 aa16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 GATA6Q92908 595 aa16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 COLEC11Q9BWP8 271 aa16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 GPR62Q9BZJ7 368 aa16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 UBN1Q9NPG3 1134 aa16.51■□□□□ 0.23
HMGXB4-206ENST00000466438 WDR64B1ANS9 1081 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 E7EWF7 191 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 PAPSS2O95340 614 aaPredicted RBP16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 NCLP19338 710 aaKnown RBP16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 DNM2P50570 870 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 ADCY7P51828 1080 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 NAPAP54920 295 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 PABPC1LQ4VXU2 614 aaKnown RBP16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 TTC22Q5TAA0 569 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 WWC2Q6AWC2 1192 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 TYW1BQ6NUM6 668 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 SPEM1Q8N4L4 309 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 ZCCHC14Q8WYQ9 949 aaKnown RBP16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 FAM3CQ92520 227 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 ELSPBP1Q96BH3 223 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 LOXL4Q96JB6 756 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 IL25Q9H293 177 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 ARRDC1-AS1Q9H2J1 176 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 GDE1Q9NZC3 331 aa16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 ASH1LQ9NR48 2969 aaKnown RBP16.5■□□□□ 0.23
HMGXB4-206ENST00000466438 IGKV6-21A0A0C4DH24 114 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 K7ESF4 209 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 AXIN1O15169 862 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 CYP3A4P08684 503 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 SPINK2P20155 84 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 CLK2P49760 499 aaKnown RBP16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 NOVA1P51513 510 aaKnown RBP16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 GAS6Q14393 721 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 CCDC6Q16204 474 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 UBXN11Q5T124 520 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 RHPN2Q8IUC4 686 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 MB21D2Q8IYB1 491 aaPredicted RBP16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 CCDC82Q8N4S0 544 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 CNNM3Q8NE01 707 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 CRYGNQ8WXF5 182 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 ING5Q8WYH8 240 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 NLRP4Q96MN2 994 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 BRD9Q9H8M2 597 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 TAF6LQ9Y6J9 622 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 DMXL2Q8TDJ6 3036 aa16.49■□□□□ 0.23
HMGXB4-206ENST00000466438 NOTCH4Q99466 2003 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 COL4A2P08572 1712 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 ARL5CA6NH57 179 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 EIF5BO60841 1220 aaKnown RBP16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 EPN2O95208 641 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 CALM1P0DP23 149 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 CALM2P0DP24 149 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 CALM3P0DP25 149 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 CHRNB1P11230 501 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 ITGA4P13612 1032 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 RXRAP19793 462 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 ZNF252P-AS1Q0IIN9 211 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 UGCGQ16739 394 aa16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 HEATR6Q6AI08 1181 aaKnown RBP16.48■□□□□ 0.23
HMGXB4-206ENST00000466438 TANGO2Q6ICL3 276 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms