RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 HSPA8P11142 646 aaKnown RBP20.25■□□□□ 0.83
CAPN3-209ENST00000466222 FGFR4P22455 802 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 FXR1P51114 621 aaKnown RBP eCLIP20.25■□□□□ 0.83
CAPN3-209ENST00000466222 GPC3P51654 580 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 LBX1P52954 281 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 ACLYP53396 1101 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 MBTD1Q05BQ5 628 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 ZNF771Q7L3S4 317 aaPredicted RBP20.25■□□□□ 0.83
CAPN3-209ENST00000466222 SRGAP1Q7Z6B7 1085 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 CPLX3Q8WVH0 158 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 WNT8BQ93098 351 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 HVCN1Q96D96 273 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 TMEM134Q9H6X4 195 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 GTF2IRD1Q9UHL9 959 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 CDC23Q9UJX2 597 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 EXOC7Q9UPT5 735 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 ARID2Q68CP9 1835 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 LIG4P49917 911 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 UBXN1Q04323 297 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 TRIM59Q8IWR1 403 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 BORCS6Q96GS4 357 aa20.25■□□□□ 0.83
CAPN3-209ENST00000466222 CASP8AP2Q9UKL3 1982 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 SMIM35A0A1B0GVV1 85 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 H0YCG3 227 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 ASAP2O43150 1006 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 PRKCBP05771 671 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 TFDP1Q14186 410 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 NFIL3Q16649 462 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 TEX35Q5T0J7 233 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 ZBTB8OSQ8IWT0 167 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 FAM186BQ8IYM0 893 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 GOLGA5Q8TBA6 731 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 POMGNT1Q8WZA1 660 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 SCLT1Q96NL6 688 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 DEFB118Q96PH6 123 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 ADAMTS10Q9H324 1103 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 ANKFY1Q9P2R3 1169 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 KCNG1Q9UIX4 513 aa20.24■□□□□ 0.83
CAPN3-209ENST00000466222 LGALS16A8MUM7 142 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 GPR32O75388 356 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 KLK7P49862 253 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 EFNA5P52803 228 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 MARSP56192 900 aaKnown RBP20.23■□□□□ 0.83
CAPN3-209ENST00000466222 BRD3Q15059 726 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 MAPK6Q16659 721 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 VWA3BQ502W6 1294 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 SEZ6Q53EL9 994 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 CBWD2Q8IUF1 395 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 SLC9A9Q8IVB4 645 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 PCSK9Q8NBP7 692 aaKnown RBP20.23■□□□□ 0.83
CAPN3-209ENST00000466222 NDST4Q9H3R1 872 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 FZD8Q9H461 694 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 LZTFL1Q9NQ48 299 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 ARMCX3Q9UH62 379 aaPredicted RBP20.23■□□□□ 0.83
CAPN3-209ENST00000466222 CTAGE9A4FU28 777 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 PSMC2P35998 433 aaKnown RBP20.23■□□□□ 0.83
CAPN3-209ENST00000466222 ZBTB41Q5SVQ8 909 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 CC2D1AQ6P1N0 951 aaPredicted RBP20.23■□□□□ 0.83
CAPN3-209ENST00000466222 XXYLT1Q8NBI6 393 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 KCNN1Q92952 543 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 OSMRQ99650 979 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 RNF208Q9H0X6 261 aa20.23■□□□□ 0.83
CAPN3-209ENST00000466222 GNA14O95837 355 aa20.22■□□□□ 0.83
CAPN3-209ENST00000466222 EPB41P11171 864 aaKnown RBP20.22■□□□□ 0.83
CAPN3-209ENST00000466222 HARSP12081 509 aaKnown RBP20.22■□□□□ 0.83
CAPN3-209ENST00000466222 CCL5P13501 91 aa20.22■□□□□ 0.83
CAPN3-209ENST00000466222 DLG4P78352 724 aa20.22■□□□□ 0.83
CAPN3-209ENST00000466222 ITGA7Q13683 1181 aa20.22■□□□□ 0.83
CAPN3-209ENST00000466222 AMHR2Q16671 573 aa20.22■□□□□ 0.83
CAPN3-209ENST00000466222 DCAF17Q5H9S7 520 aaPredicted RBP20.22■□□□□ 0.83
CAPN3-209ENST00000466222 C12orf56Q8IXR9 622 aa20.22■□□□□ 0.83
CAPN3-209ENST00000466222 PLEKHO2Q8TD55 490 aa20.22■□□□□ 0.83
CAPN3-209ENST00000466222 TMEM40Q8WWA1 233 aa20.22■□□□□ 0.83
CAPN3-209ENST00000466222 ARFGAP3Q9NP61 516 aa20.22■□□□□ 0.83
CAPN3-209ENST00000466222 PAK6Q9NQU5 681 aaPredicted RBP20.22■□□□□ 0.83
CAPN3-209ENST00000466222 FRMD4BQ9Y2L6 1034 aa20.22■□□□□ 0.83
CAPN3-209ENST00000466222 LOXHD1Q8IVV2 1947 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 CCDC151A5D8V7 595 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 SLC16A3O15427 465 aaKnown RBP20.21■□□□□ 0.83
CAPN3-209ENST00000466222 PIGRP01833 764 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 ADRB2P07550 413 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 TRIM49P0CI25 452 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 TRIM49CP0CI26 452 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 PHKA2P46019 1235 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 PLA2G4AP47712 749 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 MAN2A1Q16706 1144 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 FRMD5Q7Z6J6 570 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 ZBTB33Q86T24 672 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 ACO2Q99798 780 aaKnown RBP20.21■□□□□ 0.83
CAPN3-209ENST00000466222 FAM213AQ9BRX8 229 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 C2orf40Q9H1Z8 148 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 TRMT13Q9NUP7 481 aaKnown RBP20.21■□□□□ 0.83
CAPN3-209ENST00000466222 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.21■□□□□ 0.83
CAPN3-209ENST00000466222 TUBBP07437 444 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 GNAT1P11488 350 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 KRT9P35527 623 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 ACOT2P49753 483 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 WHAMMP3Q1A5X7 153 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 ZNF569Q5MCW4 686 aa20.21■□□□□ 0.83
CAPN3-209ENST00000466222 TAF3Q5VWG9 929 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms