RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TLR9Q9NR96 1032 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 DNAJB4Q9UDY4 337 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 GIT1Q9Y2X7 761 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 PLXNA3P51805 1871 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 CARNS1A5YM72 827 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 H0YCG3 227 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 IRS1P35568 1242 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 KRT85P78386 507 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 PLCB3Q01970 1234 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 GRIK3Q13003 919 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 E2F4Q16254 413 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 TCEAL5Q5H9L2 206 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 SV2BQ7L1I2 683 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 DYMQ7RTS9 669 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 TMEM173Q86WV6 379 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-206ENST00000465877 MYCT1Q8N699 235 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 SLC17A8Q8NDX2 589 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 MRPS27Q92552 414 aaKnown RBP14.17□□□□□ -0.14
COL5A1-206ENST00000465877 KCNN1Q92952 543 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 CHAMP1Q96JM3 812 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 RPS6KC1Q96S38 1066 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 ACO2Q99798 780 aaKnown RBP14.17□□□□□ -0.14
COL5A1-206ENST00000465877 NTPCRQ9BSD7 190 aaKnown RBP14.17□□□□□ -0.14
COL5A1-206ENST00000465877 ZHX3Q9H4I2 956 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 SNTG2Q9NY99 539 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 SPG21Q9NZD8 308 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 KCNG1Q9UIX4 513 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 PCDHA7Q9UN72 937 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 LZTS1Q9Y250 596 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 TNFSF13BQ9Y275 285 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 VWA8A3KMH1 1905 aa14.17□□□□□ -0.14
COL5A1-206ENST00000465877 NT5C1B-RDH14C9J2C7 533 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 TRAK2O60296 914 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 DDHD2O94830 711 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 PROZP22891 400 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 SLC11A1P49279 550 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 ALDH7A1P49419 539 aaKnown RBP14.16□□□□□ -0.14
COL5A1-206ENST00000465877 RESP18Q5W5W9 173 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 MPZL3Q6UWV2 235 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 HAUS6Q7Z4H7 955 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 APBB1IPQ7Z5R6 666 aaPredicted RBP14.16□□□□□ -0.14
COL5A1-206ENST00000465877 SFR1Q86XK3 245 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 ZNF280BQ86YH2 543 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 FAM178BQ8IXR5 827 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 CEP120Q8N960 986 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 BCL7CQ8WUZ0 217 aaPredicted RBP14.16□□□□□ -0.14
COL5A1-206ENST00000465877 DDX12PQ92771 950 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 TMEM169Q96HH4 297 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 FAM193BQ96PV7 902 aaPredicted RBP14.16□□□□□ -0.14
COL5A1-206ENST00000465877 FIZ1Q96SL8 496 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 TMEM175Q9BSA9 504 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 TARS2Q9BW92 718 aaKnown RBP14.16□□□□□ -0.14
COL5A1-206ENST00000465877 PTPRHQ9HD43 1115 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 ENTPD7Q9NQZ7 604 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 KLK14Q9P0G3 267 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 KANSL3Q9P2N6 904 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 ANKFY1Q9P2R3 1169 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 PARP2Q9UGN5 583 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 PCDHGC5Q9Y5F6 944 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 ATP6V1DQ9Y5K8 247 aa14.16□□□□□ -0.14
COL5A1-206ENST00000465877 TCF20Q9UGU0 1960 aaKnown RBP14.16□□□□□ -0.14
COL5A1-206ENST00000465877 MYMKA6NI61 221 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 ABLIM1O14639 778 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 GALTP07902 379 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 HARSP12081 509 aaKnown RBP14.15□□□□□ -0.14
COL5A1-206ENST00000465877 SCP2P22307 547 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 DSC1Q08554 894 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 NOLC1Q14978 699 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL5A1-206ENST00000465877 PLPP4Q5VZY2 271 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 ZPBP2Q6X784 338 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 ADGRD2Q7Z7M1 963 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 GSTCDQ8NEC7 633 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 LEO1Q8WVC0 666 aaPredicted RBP14.15□□□□□ -0.14
COL5A1-206ENST00000465877 PPP2R3CQ969Q6 453 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 DHX58Q96C10 678 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 DNAJC19Q96DA6 116 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 BICD1Q96G01 975 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 IGSF21Q96ID5 467 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 SPATA32Q96LK8 384 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 TCF25Q9BQ70 676 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 PANK2Q9BZ23 570 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 TNMDQ9H2S6 317 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 CUEDC2Q9H467 287 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 UBE2ZQ9H832 354 aaPredicted RBP14.15□□□□□ -0.14
COL5A1-206ENST00000465877 RCOR1Q9UKL0 485 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 COG5Q9UP83 839 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 GDAQ9Y2T3 454 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 TSC2P49815 1807 aa14.15□□□□□ -0.14
COL5A1-206ENST00000465877 FRMD3A2A2Y4 597 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 PTGESO14684 152 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 FSCN2O14926 492 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 HNRNPDLO14979 420 aaKnown RBP14.14□□□□□ -0.15
COL5A1-206ENST00000465877 TOM1L1O75674 476 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 MCF2P10911 925 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 NMT1P30419 496 aaKnown RBP14.14□□□□□ -0.15
COL5A1-206ENST00000465877 GRM5P41594 1212 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 ERVFC1P60507 584 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 TFF2Q03403 129 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 KRT17Q04695 432 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 HYAL1Q12794 435 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms