RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 PRSS55Q6UWB4 352 aaPredicted RBP11.5□□□□□ -0.57
GPNMB-206ENST00000465673 TRIM22Q8IYM9 498 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 DAGLBQ8NCG7 672 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 ASAP3Q8TDY4 903 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 STAMQ92783 540 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 LXNQ9BS40 222 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 C22orf23Q9BZE7 217 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 ARHGEF3Q9NR81 526 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 STK39Q9UEW8 545 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 SIT1Q9Y3P8 196 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 NCOR2Q9Y618 2525 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 CACNA1IQ9P0X4 2223 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 DNAH14Q0VDD8 3507 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 OTOGLQ3ZCN5 2332 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 FAM205CA6NFA0 338 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 INO80B-WBP1J3KQ70 363 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 DEXIO95424 95 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 RFC5P40937 340 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 PTENP60484 403 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 EPHA7Q15375 998 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 AMHR2Q16671 573 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 RTP2Q5QGT7 225 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 NCAPH2Q6IBW4 605 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 FUT10Q6P4F1 479 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 DCLRE1AQ6PJP8 1040 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 MOXD1Q6UVY6 613 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 PARM1Q6UWI2 310 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 GRASPQ7Z6J2 395 aaPredicted RBP11.49□□□□□ -0.57
GPNMB-206ENST00000465673 POTEDQ86YR6 584 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 C1orf210Q8IVY1 113 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 C4orf19Q8IY42 314 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 MAML2Q8IZL2 1156 aaPredicted RBP11.49□□□□□ -0.57
GPNMB-206ENST00000465673 HASPINQ8TF76 798 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 FGF14Q92915 247 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 HINFPQ9BQA5 517 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 COLEC11Q9BWP8 271 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 RHOBTB2Q9BYZ6 727 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 PRKD2Q9BZL6 878 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 CSRNP2Q9H175 543 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 CXCL16Q9H2A7 254 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 SSX2IPQ9Y2D8 614 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 MTF2Q9Y483 593 aaPredicted RBP11.49□□□□□ -0.57
GPNMB-206ENST00000465673 CEP250Q9BV73 2442 aa11.49□□□□□ -0.57
GPNMB-206ENST00000465673 CPLX1O14810 134 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 ADAM12O43184 909 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 CCNT1O60563 726 aaKnown RBP11.48□□□□□ -0.57
GPNMB-206ENST00000465673 ZMYND10O75800 440 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 NPTXRO95502 500 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 ARF4P18085 180 aaPredicted RBP11.48□□□□□ -0.57
GPNMB-206ENST00000465673 FSHRP23945 695 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 IGFBP6P24592 240 aaPredicted RBP11.48□□□□□ -0.57
GPNMB-206ENST00000465673 MBTD1Q05BQ5 628 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 SNW1Q13573 536 aaKnown RBP11.48□□□□□ -0.57
GPNMB-206ENST00000465673 CAPSQ13938 189 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 PHLDB3Q6NSJ2 640 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 NOTUMQ6P988 496 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 CYP26C1Q6V0L0 522 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 PIK3AP1Q6ZUJ8 805 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 RUFY3Q7L099 469 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 DGLUCYQ7Z3D6 616 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 KRT25Q7Z3Z0 450 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 TPH2Q8IWU9 490 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 CNNM3Q8NE01 707 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 TCP11Q8WWU5 503 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 FAM20AQ96MK3 541 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 MTRQ99707 1265 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 PLEKHA4Q9H4M7 779 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 UBN1Q9NPG3 1134 aa11.48□□□□□ -0.57
GPNMB-206ENST00000465673 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.48□□□□□ -0.57
GPNMB-206ENST00000465673 CCDC194A0A1B0GVG4 234 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 ASAP2O43150 1006 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 MARCH6O60337 910 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 DKC1O60832 514 aaKnown RBP eCLIP11.47□□□□□ -0.57
GPNMB-206ENST00000465673 TADA2AO75478 443 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 SLITRK3O94933 977 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 PAPLNO95428 1278 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 CD72P21854 359 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 GLRA2P23416 452 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 PSMA5P28066 241 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 SPIRE1Q08AE8 756 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 USP41Q3LFD5 358 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 PPP4R3AQ6IN85 833 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 MAEAQ7L5Y9 396 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 OTUD6AQ7L8S5 288 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 NEK8Q86SG6 692 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 PJA1Q8NG27 643 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 ITFG1Q8TB96 612 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 HDAC7Q8WUI4 952 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 NXPE3Q969Y0 559 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 CLSTN3Q9BQT9 956 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 PHF20Q9BVI0 1012 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 TRIM6Q9C030 488 aaPredicted RBP11.47□□□□□ -0.57
GPNMB-206ENST00000465673 SEMA4AQ9H3S1 761 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 SLC2A4RGQ9NR83 387 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 ZDHHC7Q9NXF8 308 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 PARP2Q9UGN5 583 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms