RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 PRDM5Q9NQX1 630 aaPredicted RBP18.79■□□□□ 0.6
PTPRU-206ENST00000465525 AGO2Q9UKV8 859 aaKnown RBP18.79■□□□□ 0.6
PTPRU-206ENST00000465525 ST3GAL5Q9UNP4 418 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 STYXL1Q9Y6J8 313 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 SQORQ9Y6N5 450 aa18.79■□□□□ 0.6
PTPRU-206ENST00000465525 EVI5O60447 810 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 PARNO95453 639 aaKnown RBP18.78■□□□□ 0.6
PTPRU-206ENST00000465525 ADRB2P07550 413 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 GARTP22102 1010 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 PROZP22891 400 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 MTIF2P46199 727 aaKnown RBP18.78■□□□□ 0.6
PTPRU-206ENST00000465525 OSTNP61366 133 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 FANCCQ00597 558 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 KRT31Q15323 416 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 SLFN12LQ6IEE8 588 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 FILIP1Q7Z7B0 1213 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 CBWD2Q8IUF1 395 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 SLC9A9Q8IVB4 645 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 FAM186BQ8IYM0 893 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 CDT1Q9H211 546 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 PTPRHQ9HD43 1115 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 AGPAT5Q9NUQ2 364 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 PRKAG2Q9UGJ0 569 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 FRMD4BQ9Y2L6 1034 aa18.78■□□□□ 0.6
PTPRU-206ENST00000465525 TRIM43BA6NCK2 446 aa18.77■□□□□ 0.6
PTPRU-206ENST00000465525 TIMP1P01033 207 aa18.77■□□□□ 0.6
PTPRU-206ENST00000465525 EPB41P11171 864 aaKnown RBP18.77■□□□□ 0.6
PTPRU-206ENST00000465525 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.6
PTPRU-206ENST00000465525 MRE11P49959 708 aa18.77■□□□□ 0.6
PTPRU-206ENST00000465525 NOLC1Q14978 699 aaKnown RBP eCLIP18.77■□□□□ 0.6
PTPRU-206ENST00000465525 PCBP1Q15365 356 aaKnown RBP eCLIP18.77■□□□□ 0.6
PTPRU-206ENST00000465525 FAM114A1Q8IWE2 563 aa18.77■□□□□ 0.6
PTPRU-206ENST00000465525 THNSL1Q8IYQ7 743 aa18.77■□□□□ 0.6
PTPRU-206ENST00000465525 CEP120Q8N960 986 aa18.77■□□□□ 0.6
PTPRU-206ENST00000465525 USP38Q8NB14 1042 aa18.77■□□□□ 0.6
PTPRU-206ENST00000465525 DPF3Q92784 378 aa18.77■□□□□ 0.6
PTPRU-206ENST00000465525 TRIM43Q96BQ3 446 aaPredicted RBP18.77■□□□□ 0.6
PTPRU-206ENST00000465525 EIF2AQ9BY44 585 aaKnown RBP18.77■□□□□ 0.6
PTPRU-206ENST00000465525 NPTXRO95502 500 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 SERPINC1P01008 464 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 RAG1P15918 1043 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 CYP2C18P33260 490 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 PSMC2P35998 433 aaKnown RBP18.76■□□□□ 0.59
PTPRU-206ENST00000465525 TNFSF9P41273 254 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 CCL23P55773 120 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 MCL1Q07820 350 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 NCBP1Q09161 790 aaKnown RBP18.76■□□□□ 0.59
PTPRU-206ENST00000465525 PAK2Q13177 524 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 C7orf61Q8IZ16 206 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 GPD1LQ8N335 351 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 SCLYQ96I15 445 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 VPS16Q9H269 839 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 ERVK-5Q9HDB9 667 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 IFNKQ9P0W0 207 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 PADI3Q9ULW8 664 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 A0A1B0GUA9 196 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 N4BP3O15049 544 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 SLC16A3O15427 465 aaKnown RBP18.76■□□□□ 0.59
PTPRU-206ENST00000465525 EEF1GP26641 437 aaKnown RBP18.76■□□□□ 0.59
PTPRU-206ENST00000465525 MYBPC2Q14324 1141 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 SNRNP35Q16560 246 aaKnown RBP18.76■□□□□ 0.59
PTPRU-206ENST00000465525 PTPN21Q16825 1174 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 NOTUMQ6P988 496 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 TMEM192Q8IY95 271 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 NAP1L5Q96NT1 182 aaPredicted RBP18.76■□□□□ 0.59
PTPRU-206ENST00000465525 TUBGCP2Q9BSJ2 902 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 WNT8AQ9H1J5 351 aa18.76■□□□□ 0.59
PTPRU-206ENST00000465525 ANK1P16157 1881 aa18.75■□□□□ 0.59
PTPRU-206ENST00000465525 PES1O00541 588 aaKnown RBP18.75■□□□□ 0.59
PTPRU-206ENST00000465525 EXTL3O43909 919 aa18.75■□□□□ 0.59
PTPRU-206ENST00000465525 PRKCSHP14314 528 aaPredicted RBP18.75■□□□□ 0.59
PTPRU-206ENST00000465525 COPB1P53618 953 aaKnown RBP18.75■□□□□ 0.59
PTPRU-206ENST00000465525 CRELD2Q6UXH1 353 aaPredicted RBP18.75■□□□□ 0.59
PTPRU-206ENST00000465525 APTXQ7Z2E3 356 aaKnown RBP18.75■□□□□ 0.59
PTPRU-206ENST00000465525 ARMCX3Q9UH62 379 aaPredicted RBP18.75■□□□□ 0.59
PTPRU-206ENST00000465525 LIMA1Q9UHB6 759 aaKnown RBP18.75■□□□□ 0.59
PTPRU-206ENST00000465525 GPR182O15218 404 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 OGTO15294 1046 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 FAM189A1O60320 539 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 NBNO60934 754 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 GNA14O95837 355 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 TRIM49P0CI25 452 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 TRIM49CP0CI26 452 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 IBSPP21815 317 aaPredicted RBP18.74■□□□□ 0.59
PTPRU-206ENST00000465525 WNT7BP56706 349 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 SPAG1Q07617 926 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 GPNMBQ14956 572 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 DCAF17Q5H9S7 520 aaPredicted RBP18.74■□□□□ 0.59
PTPRU-206ENST00000465525 UBXN11Q5T124 520 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 MFSD5Q6N075 450 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 SLC27A1Q6PCB7 646 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 ANKRD20A12PQ8NF67 263 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 PLEKHO2Q8TD55 490 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 BORCS6Q96GS4 357 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 ADPGKQ9BRR6 497 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 TRIM5Q9C035 493 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 TMX1Q9H3N1 280 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 HES2Q9Y543 173 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 TET1Q8NFU7 2136 aa18.74■□□□□ 0.59
PTPRU-206ENST00000465525 TRIP11Q15643 1979 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms