RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 FBXO18Q8NFZ0 1043 aa23.11■■□□□ 1.29
CSPG5-204ENST00000465441 COLEC11Q9BWP8 271 aa23.11■■□□□ 1.29
CSPG5-204ENST00000465441 FZD8Q9H461 694 aa23.11■■□□□ 1.29
CSPG5-204ENST00000465441 PRMT7Q9NVM4 692 aaPredicted RBP23.11■■□□□ 1.29
CSPG5-204ENST00000465441 KLK14Q9P0G3 267 aa23.11■■□□□ 1.29
CSPG5-204ENST00000465441 PARP2Q9UGN5 583 aa23.11■■□□□ 1.29
CSPG5-204ENST00000465441 SPDYE4A6NLX3 237 aa23.1■■□□□ 1.29
CSPG5-204ENST00000465441 BRD1O95696 1058 aa23.1■■□□□ 1.29
CSPG5-204ENST00000465441 ASGR2P07307 311 aa23.1■■□□□ 1.29
CSPG5-204ENST00000465441 OR52Z1P0C646 297 aa23.1■■□□□ 1.29
CSPG5-204ENST00000465441 AVPR2P30518 371 aa23.1■■□□□ 1.29
CSPG5-204ENST00000465441 MRE11P49959 708 aa23.1■■□□□ 1.29
CSPG5-204ENST00000465441 VCPP55072 806 aaKnown RBP23.1■■□□□ 1.29
CSPG5-204ENST00000465441 PPP4R3CPQ6ZMV5 832 aa23.1■■□□□ 1.29
CSPG5-204ENST00000465441 UBALD2Q8IYN6 164 aa23.1■■□□□ 1.29
CSPG5-204ENST00000465441 RXFP1Q9HBX9 757 aa23.1■■□□□ 1.29
CSPG5-204ENST00000465441 TEX28O15482 410 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 PDGFBP01127 241 aaPredicted RBP23.09■■□□□ 1.29
CSPG5-204ENST00000465441 GLUD2P49448 558 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 DSG1Q02413 1049 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 ORC2Q13416 577 aaPredicted RBP23.09■■□□□ 1.29
CSPG5-204ENST00000465441 MTMR3Q13615 1198 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 FAM187BQ17R55 369 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 TTC38Q5R3I4 469 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 CDCA2Q69YH5 1023 aaPredicted RBP23.09■■□□□ 1.29
CSPG5-204ENST00000465441 POTEGQ6S5H5 508 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 PADI6Q6TGC4 694 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 ZBTB8OSQ8IWT0 167 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 ERMNQ8TAM6 284 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 PRIMPOLQ96LW4 560 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 ZSCAN31Q96LW9 406 aaPredicted RBP23.09■■□□□ 1.29
CSPG5-204ENST00000465441 PRRX2Q99811 253 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 SMOC2Q9H3U7 446 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 CHST7Q9NS84 486 aa23.09■■□□□ 1.29
CSPG5-204ENST00000465441 TTLL13PA6NNM8 815 aa23.08■■□□□ 1.29
CSPG5-204ENST00000465441 CYP11B2P19099 503 aa23.08■■□□□ 1.29
CSPG5-204ENST00000465441 C4orf32Q8N8J7 132 aa23.08■■□□□ 1.29
CSPG5-204ENST00000465441 BSNDQ8WZ55 320 aa23.08■■□□□ 1.29
CSPG5-204ENST00000465441 RABGGTAQ92696 567 aa23.08■■□□□ 1.29
CSPG5-204ENST00000465441 KIF2CQ99661 725 aa23.08■■□□□ 1.29
CSPG5-204ENST00000465441 GPR62Q9BZJ7 368 aa23.08■■□□□ 1.29
CSPG5-204ENST00000465441 POLD4Q9HCU8 107 aa23.08■■□□□ 1.29
CSPG5-204ENST00000465441 ARHGEF35A5YM69 484 aa23.07■■□□□ 1.28
CSPG5-204ENST00000465441 ADH1AP07327 375 aa23.07■■□□□ 1.28
CSPG5-204ENST00000465441 MYBP10242 640 aa23.07■■□□□ 1.28
CSPG5-204ENST00000465441 RBM25P49756 843 aaKnown RBP23.07■■□□□ 1.28
CSPG5-204ENST00000465441 PTPN5P54829 565 aa23.07■■□□□ 1.28
CSPG5-204ENST00000465441 HMGN5P82970 282 aaKnown RBP23.07■■□□□ 1.28
CSPG5-204ENST00000465441 TCF15Q12870 199 aa23.07■■□□□ 1.28
CSPG5-204ENST00000465441 GRIK3Q13003 919 aa23.07■■□□□ 1.28
CSPG5-204ENST00000465441 ECM1Q16610 540 aa23.07■■□□□ 1.28
CSPG5-204ENST00000465441 C15orf39Q6ZRI6 1047 aa23.07■■□□□ 1.28
CSPG5-204ENST00000465441 FAM184AQ8NB25 1140 aa23.07■■□□□ 1.28
CSPG5-204ENST00000465441 ACSF2Q96CM8 615 aaPredicted RBP23.07■■□□□ 1.28
CSPG5-204ENST00000465441 MAN1C1Q9NR34 630 aa23.07■■□□□ 1.28
CSPG5-204ENST00000465441 USP20Q9Y2K6 914 aa23.07■■□□□ 1.28
CSPG5-204ENST00000465441 TDRD15B5MCY1 1934 aaKnown RBP23.07■■□□□ 1.28
CSPG5-204ENST00000465441 CCDC195A0A1B0GUA6 201 aa23.06■■□□□ 1.28
CSPG5-204ENST00000465441 FUT10Q6P4F1 479 aa23.06■■□□□ 1.28
CSPG5-204ENST00000465441 CCDC149Q6ZUS6 474 aa23.06■■□□□ 1.28
CSPG5-204ENST00000465441 NOSTRINQ8IVI9 506 aa23.06■■□□□ 1.28
CSPG5-204ENST00000465441 CMASQ8NFW8 434 aaPredicted RBP23.06■■□□□ 1.28
CSPG5-204ENST00000465441 B3GALT6Q96L58 329 aa23.06■■□□□ 1.28
CSPG5-204ENST00000465441 PHOX2BQ99453 314 aa23.06■■□□□ 1.28
CSPG5-204ENST00000465441 C2orf40Q9H1Z8 148 aa23.06■■□□□ 1.28
CSPG5-204ENST00000465441 SNTG2Q9NY99 539 aa23.06■■□□□ 1.28
CSPG5-204ENST00000465441 CACNG4Q9UBN1 327 aa23.06■■□□□ 1.28
CSPG5-204ENST00000465441 ADAM28Q9UKQ2 775 aa23.06■■□□□ 1.28
CSPG5-204ENST00000465441 TADA2AO75478 443 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 SPATA31D3P0C874 917 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 MUTP22033 750 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 TRAPPC10P48553 1259 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 PRPF4BQ13523 1007 aaKnown RBP23.05■■□□□ 1.28
CSPG5-204ENST00000465441 GNL2Q13823 731 aaKnown RBP23.05■■□□□ 1.28
CSPG5-204ENST00000465441 NBR1Q14596 966 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 MAPK6Q16659 721 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 USP41Q3LFD5 358 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 SPATA31D4Q6ZUB0 917 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 OTOP3Q7RTS5 596 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 PALB2Q86YC2 1186 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 PDZD7Q9H5P4 517 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 SH2B1Q9NRF2 756 aaPredicted RBP23.05■■□□□ 1.28
CSPG5-204ENST00000465441 WDFY4Q6ZS81 3184 aa23.05■■□□□ 1.28
CSPG5-204ENST00000465441 ACKR2O00590 384 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 N4BP3O15049 544 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 GLUD1P00367 558 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 PRKCBP05771 671 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 LIG1P18858 919 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 CCT6AP40227 531 aaKnown RBP23.04■■□□□ 1.28
CSPG5-204ENST00000465441 NAMPTP43490 491 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 FXR2P51116 673 aaKnown RBP eCLIP23.04■■□□□ 1.28
CSPG5-204ENST00000465441 DEPTORQ8TB45 409 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 PAAF1Q9BRP4 392 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 CCDC113Q9H0I3 377 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 CXCL16Q9H2A7 254 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 LRWD1Q9UFC0 647 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 DPP7Q9UHL4 492 aa23.04■■□□□ 1.28
CSPG5-204ENST00000465441 NOL7Q9UMY1 257 aaKnown RBP23.04■■□□□ 1.28
CSPG5-204ENST00000465441 ZMYM2Q9UBW7 1377 aa23.03■■□□□ 1.28
CSPG5-204ENST00000465441 RFPL2O75678 378 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms