RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 HTATIP2Q9BUP3 242 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 ERVK-5Q9HDB9 667 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 AGPAT3Q9NRZ7 376 aa18.49■□□□□ 0.55
EXOSC3-203ENST00000465229 A0A1B0GUA9 196 aa18.48■□□□□ 0.55
EXOSC3-203ENST00000465229 CLIC2O15247 247 aa18.48■□□□□ 0.55
EXOSC3-203ENST00000465229 TBX2Q13207 712 aaPredicted RBP18.48■□□□□ 0.55
EXOSC3-203ENST00000465229 ATF7IP2Q5U623 682 aa18.48■□□□□ 0.55
EXOSC3-203ENST00000465229 C17orf53Q8N3J3 647 aaPredicted RBP18.48■□□□□ 0.55
EXOSC3-203ENST00000465229 DUSP9Q99956 384 aaKnown RBP18.48■□□□□ 0.55
EXOSC3-203ENST00000465229 PTPRHQ9HD43 1115 aa18.48■□□□□ 0.55
EXOSC3-203ENST00000465229 AGPAT5Q9NUQ2 364 aa18.48■□□□□ 0.55
EXOSC3-203ENST00000465229 LIMA1Q9UHB6 759 aaKnown RBP18.48■□□□□ 0.55
EXOSC3-203ENST00000465229 TNFSF13BQ9Y275 285 aa18.48■□□□□ 0.55
EXOSC3-203ENST00000465229 STYXL1Q9Y6J8 313 aa18.48■□□□□ 0.55
EXOSC3-203ENST00000465229 BICDL2A1A5D9 508 aa18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 TOM1L1O75674 476 aa18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 PROZP22891 400 aa18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 SNRPFP62306 86 aaKnown RBP18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 LRRC63Q05C16 580 aa18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 NCBP1Q09161 790 aaKnown RBP18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 PAK2Q13177 524 aa18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 TPD52L1Q16890 204 aaPredicted RBP18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 EEF1DP3Q658K8 133 aa18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 SPECC1LQ69YQ0 1117 aa18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 FOXR2Q6PJQ5 311 aa18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 CDR2LQ86X02 465 aaPredicted RBP18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 GOLGA5Q8TBA6 731 aa18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 HAPLN2Q9GZV7 340 aa18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 CGNQ9P2M7 1197 aaKnown RBP18.47■□□□□ 0.55
EXOSC3-203ENST00000465229 ABLIM1O14639 778 aa18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 CALUO43852 315 aaPredicted RBP18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 PARNO95453 639 aaKnown RBP18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 RAG1P15918 1043 aa18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 AXLP30530 894 aa18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 TMEM132AQ24JP5 1023 aa18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 FILIP1LQ4L180 1135 aa18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 NOC3LQ8WTT2 800 aaKnown RBP18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 TSG101Q99816 390 aa18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 CBWD1Q9BRT8 395 aa18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 TMX1Q9H3N1 280 aa18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 PDZD7Q9H5P4 517 aa18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 PIN4Q9Y237 131 aaKnown RBP18.46■□□□□ 0.55
EXOSC3-203ENST00000465229 CLDN3O15551 220 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 EDRF1Q3B7T1 1238 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 PLEKHG4Q58EX7 1191 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 SLFN12LQ6IEE8 588 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 C12orf56Q8IXR9 622 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 C7orf61Q8IZ16 206 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 ANKRD20A12PQ8NF67 263 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 TMEM174Q8WUU8 243 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 VWCEQ96DN2 955 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 TCHPQ9BT92 498 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 IFIH1Q9BYX4 1025 aaKnown RBP18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 CHST12Q9NRB3 414 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 DMAC2Q9NW81 257 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 PCDH10Q9P2E7 1040 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 ANKFY1Q9P2R3 1169 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 SIP14410 1827 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 A0A0B4J269 797 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 EVI5O60447 810 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 CXCL10P02778 98 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 NR3C1P04150 777 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 GARTP22102 1010 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 MCL1Q07820 350 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 NFIL3Q16649 462 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 DNTTIP2Q5QJE6 756 aaKnown RBP18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 MFSD5Q6N075 450 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 NOTUMQ6P988 496 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 MPZL3Q6UWV2 235 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 ZBTB33Q86T24 672 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 DBF4BQ8NFT6 615 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 POMGNT1Q8WZA1 660 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 EEF2KMTQ96G04 330 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 PCIF1Q9H4Z3 704 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 THAP9Q9H5L6 903 aa18.45■□□□□ 0.54
EXOSC3-203ENST00000465229 ALPK3Q96L96 1907 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 N4BP3O15049 544 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 PBX1P40424 430 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 FKBP3Q00688 224 aaKnown RBP18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 ADAM9Q13443 819 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 DSC3Q14574 896 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 SLC9A9Q8IVB4 645 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 ZC3H3Q8IXZ2 948 aaKnown RBP18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 CSGALNACT2Q8N6G5 542 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 ZSWIM2Q8NEG5 633 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 DPF3Q92784 378 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 CDT1Q9H211 546 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 PRKAG2Q9UGJ0 569 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 TET1Q8NFU7 2136 aa18.44■□□□□ 0.54
EXOSC3-203ENST00000465229 MGEA5O60502 916 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 NR2F2P24468 414 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 RPL13P26373 211 aaKnown RBP18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 MATR3P43243 847 aaKnown RBP eCLIP18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 CYP2J2P51589 502 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 MYBPC2Q14324 1141 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 ZNF568Q3ZCX4 644 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 HSP90AA4PQ58FG1 418 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 UBXN11Q5T124 520 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 SLC27A1Q6PCB7 646 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 LRRC55Q6ZSA7 311 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms