RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 CAPSQ13938 189 aa12.19□□□□□ -0.46
COL11A1-207ENST00000465209 CTTNQ14247 550 aaKnown RBP12.19□□□□□ -0.46
COL11A1-207ENST00000465209 ANGPT1Q15389 498 aa12.19□□□□□ -0.46
COL11A1-207ENST00000465209 NOTUMQ6P988 496 aa12.19□□□□□ -0.46
COL11A1-207ENST00000465209 LILRA6Q6PI73 481 aa12.19□□□□□ -0.46
COL11A1-207ENST00000465209 PIK3AP1Q6ZUJ8 805 aa12.19□□□□□ -0.46
COL11A1-207ENST00000465209 SIX5Q8N196 739 aa12.19□□□□□ -0.46
COL11A1-207ENST00000465209 FAM193BQ96PV7 902 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-207ENST00000465209 NFKBIZQ9BYH8 718 aa12.19□□□□□ -0.46
COL11A1-207ENST00000465209 GPR62Q9BZJ7 368 aa12.19□□□□□ -0.46
COL11A1-207ENST00000465209 CSRNP2Q9H175 543 aa12.19□□□□□ -0.46
COL11A1-207ENST00000465209 ZSWIM4Q9H7M6 989 aa12.19□□□□□ -0.46
COL11A1-207ENST00000465209 MIA3Q5JRA6 1907 aa12.19□□□□□ -0.46
COL11A1-207ENST00000465209 CACNA1IQ9P0X4 2223 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 TRIP11Q15643 1979 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 WNT7AO00755 349 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 B4GALT5O43286 388 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 TGM5O43548 720 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 ERLIN2O94905 339 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 ARL2P36404 184 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 OR1G1P47890 313 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 NR5A1Q13285 461 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 MXD4Q14582 209 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-207ENST00000465209 XKR9Q5GH70 373 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 NCAPH2Q6IBW4 605 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 FUT10Q6P4F1 479 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 GPR65Q8IYL9 337 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 DTWD2Q8NBA8 298 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 HDAC7Q8WUI4 952 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 NKD2Q969F2 451 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-207ENST00000465209 B3GALT6Q96L58 329 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 HSD17B14Q9BPX1 270 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 RTP3Q9BQQ7 232 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 DLGAP2Q9P1A6 1054 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 WNT16Q9UBV4 365 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 SSX2IPQ9Y2D8 614 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 GIT1Q9Y2X7 761 aa12.18□□□□□ -0.46
COL11A1-207ENST00000465209 ANHXE9PGG2 379 aa12.17□□□□□ -0.46
COL11A1-207ENST00000465209 PFKFB2O60825 505 aa12.17□□□□□ -0.46
COL11A1-207ENST00000465209 FDPSP14324 419 aaKnown RBP12.17□□□□□ -0.46
COL11A1-207ENST00000465209 GLRA2P23416 452 aa12.17□□□□□ -0.46
COL11A1-207ENST00000465209 RARRES1P49788 294 aa12.17□□□□□ -0.46
COL11A1-207ENST00000465209 CPLX2Q6PUV4 134 aaKnown RBP12.17□□□□□ -0.46
COL11A1-207ENST00000465209 OTUD6AQ7L8S5 288 aa12.17□□□□□ -0.46
COL11A1-207ENST00000465209 SLC44A3Q8N4M1 653 aa12.17□□□□□ -0.46
COL11A1-207ENST00000465209 SMG7Q92540 1137 aaKnown RBP12.17□□□□□ -0.46
COL11A1-207ENST00000465209 EIF2AK1Q9BQI3 630 aaKnown RBP12.17□□□□□ -0.46
COL11A1-207ENST00000465209 NT5C3AQ9H0P0 336 aa12.17□□□□□ -0.46
COL11A1-207ENST00000465209 SLKQ9H2G2 1235 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-207ENST00000465209 ZDHHC7Q9NXF8 308 aa12.17□□□□□ -0.46
COL11A1-207ENST00000465209 FNIP2Q9P278 1114 aa12.17□□□□□ -0.46
COL11A1-207ENST00000465209 CACNG4Q9UBN1 327 aa12.17□□□□□ -0.46
COL11A1-207ENST00000465209 TPCN1Q9ULQ1 816 aa12.17□□□□□ -0.46
COL11A1-207ENST00000465209 A0A1B0GUA9 196 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 INO80B-WBP1J3KQ70 363 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 DGAT1O75907 488 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 CDKL5O76039 1030 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 CFHP08603 1231 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 SPATA31D3P0C874 917 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 MYBP10242 640 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 SRFP11831 508 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 AKAP5P24588 427 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 FOXK2Q01167 660 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 GRIK3Q13003 919 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 HTR4Q13639 388 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 NAB2Q15742 525 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 RTP2Q5QGT7 225 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 CDCA2Q69YH5 1023 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-207ENST00000465209 SPATA31D4Q6ZUB0 917 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 CDR2LQ86X02 465 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-207ENST00000465209 SLFN12Q8IYM2 578 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 ADSSL1Q8N142 457 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 STAMQ92783 540 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 NXPE3Q969Y0 559 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 NAP1L4Q99733 375 aaKnown RBP12.16□□□□□ -0.46
COL11A1-207ENST00000465209 PAAF1Q9BRP4 392 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 PLEKHA4Q9H4M7 779 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.16□□□□□ -0.46
COL11A1-207ENST00000465209 ANKEF1Q9NU02 776 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 PDRG1Q9NUG6 133 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 ADAM28Q9UKQ2 775 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 FBXL21Q9UKT6 434 aa12.16□□□□□ -0.46
COL11A1-207ENST00000465209 TTLL13PA6NNM8 815 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 PTGESO14684 152 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 LAMP2P13473 410 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 GLULP15104 373 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 RPL17P18621 184 aaKnown RBP12.15□□□□□ -0.46
COL11A1-207ENST00000465209 GBP2P32456 591 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-207ENST00000465209 TFDP1Q14186 410 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 USP41Q3LFD5 358 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 PHLDB3Q6NSJ2 640 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 SLC27A1Q6PCB7 646 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 PALB2Q86YC2 1186 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 TPH2Q8IWU9 490 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 GPR152Q8TDT2 470 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 RABGGTAQ92696 567 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 MTMR9Q96QG7 549 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 APOL6Q9BWW8 343 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms