RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CACNB3P54284 484 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 KIF22Q14807 665 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 ZNF568Q3ZCX4 644 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 GPATCH4Q5T3I0 446 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 RHOT2Q8IXI1 618 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 TBC1D22AQ8WUA7 517 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 FIZ1Q96SL8 496 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 STMN4Q9H169 189 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 RXFP1Q9HBX9 757 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 WRAP73Q9P2S5 460 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 MAST2Q6P0Q8 1798 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 ATP8B3O60423 1300 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 EMSYQ7Z589 1322 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 PASKQ96RG2 1323 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 ECEL1O95672 775 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 ZNF76P36508 570 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 ZNF131P52739 623 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 PPP3CAQ08209 521 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 NFIAQ12857 509 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 GRIK3Q13003 919 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 MIS18BP1Q6P0N0 1132 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 TRMT1LQ7Z2T5 733 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 TRIM7Q9C029 511 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 PARP2Q9UGN5 583 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 POLLQ9UGP5 575 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 MIF4GDA9UHW6 222 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 SPAG7O75391 227 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 SLITRK3O94933 977 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 TARSP26639 723 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 C1orf186Q6ZWK4 172 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 ZNF720Q7Z2F6 126 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 NOP9Q86U38 636 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 SLC47A2Q86VL8 602 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 FAM178BQ8IXR5 827 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 ZNF483Q8TF39 744 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 CD101Q93033 1021 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 C9orf72Q96LT7 481 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 NUP85Q9BW27 656 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 OLFML3Q9NRN5 406 aa13.49□□□□□ -0.25
CLCNKA-204ENST00000464764 CYP26A1O43174 497 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 EEF2P13639 858 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 GM2AP17900 193 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 IKQ13123 557 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 TAF11Q15544 211 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 C2CD6Q53TS8 623 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 HP1BP3Q5SSJ5 553 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 ODR4Q5SWX8 454 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 C11orf63Q6NUN7 778 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 SH2D3AQ9BRG2 576 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 TAOK3Q9H2K8 898 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 PARVGQ9HBI0 331 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 SLCO1B3Q9NPD5 702 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 HAO1Q9UJM8 370 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 NAALADL1Q9UQQ1 740 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 H0Y3Z8 333 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 C6orf229H3BNL8 230 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 ITGA8P53708 1063 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 ATP11AP98196 1134 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 HS2ST1Q7LGA3 356 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 SYCP3Q8IZU3 236 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 ROPN1BQ9BZX4 212 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 MYLK2Q9H1R3 596 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 ROPN1Q9HAT0 212 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 BATF3Q9NR55 127 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 KLHL14Q9P2G3 628 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 MTUS1Q9ULD2 1270 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 GAKO14976 1311 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 THAP12O43422 761 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 LACTBP83111 547 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 TCP10Q12799 353 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 BFSP1Q12934 665 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 EPC2Q52LR7 807 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 SGO2Q562F6 1265 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 TMEM63BQ5T3F8 832 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 CDCA2Q69YH5 1023 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 LLGL2Q6P1M3 1020 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 ARMC2Q8NEN0 867 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 ZNF564Q8TBZ8 553 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 MRRFQ96E11 262 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 FAM163AQ96GL9 167 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 RUNDC3BQ96NL0 473 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 PCDHAC2Q9Y5I4 1007 aa13.48□□□□□ -0.25
CLCNKA-204ENST00000464764 TOM1O60784 492 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 TTC4O95801 387 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 IL1R1P14778 569 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 TAC1P20366 129 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 DNAJC3Q13217 504 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 CYP1B1Q16678 543 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 Q4G0T1 1027 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 SLFN13Q68D06 897 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 TRMT10CQ7L0Y3 403 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 ERP27Q96DN0 273 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 IFT74Q96LB3 600 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 SERPINB12Q96P63 405 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 NAP1L4Q99733 375 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 HSD17B14Q9BPX1 270 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 PLCD4Q9BRC7 762 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 HEMGNQ9BXL5 484 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms