RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 SPATA31A1Q5TZJ5 1347 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 TMEM120BA0PK00 339 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 FAM187AA6NFU0 413 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 CAND2O75155 1236 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 ARSEP51690 589 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 POLE2P56282 527 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 TMPRSS15P98073 1019 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 TRADDQ15628 312 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 TMCO4Q5TGY1 634 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 MIS18BP1Q6P0N0 1132 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 MAP7D3Q8IWC1 876 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 SLC20A1Q8WUM9 679 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 ANKRD36BP1Q96IX9 119 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 YIPF3Q9GZM5 350 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 NOP53Q9NZM5 478 aaKnown RBP9.67□□□□□ -0.86
HPS4-208ENST00000464362 SEL1LQ9UBV2 794 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 REXO2Q9Y3B8 237 aaKnown RBP9.67□□□□□ -0.86
HPS4-208ENST00000464362 USH1CQ9Y6N9 552 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 ADAMTSL3P82987 1691 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 LRRC10BA6NIK2 292 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 MAP3K6O95382 1288 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 ZBED1O96006 694 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 SLC12A2P55011 1212 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 PPP4CP60510 307 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 SNRNP35Q16560 246 aaKnown RBP9.67□□□□□ -0.86
HPS4-208ENST00000464362 AP1ARQ63HQ0 302 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 PTF1AQ7RTS3 328 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 PCGF5Q86SE9 256 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 IRF2BP1Q8IU81 584 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 PRPF38AQ8NAV1 312 aaKnown RBP9.67□□□□□ -0.86
HPS4-208ENST00000464362 IFT122Q9HBG6 1241 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 ACP6Q9NPH0 428 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 AGPAT3Q9NRZ7 376 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 TACC3Q9Y6A5 838 aa9.67□□□□□ -0.86
HPS4-208ENST00000464362 FAM237AA0A1B0GTK4 181 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 TMEM150BA6NC51 233 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 MAP2K7O14733 419 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 MAPK13O15264 365 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 PRPSAP2O60256 369 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 TJP3O95049 919 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 FAM107AO95990 144 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 CCND2P30279 289 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 GIT2Q14161 759 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 FAM47CQ5HY64 1035 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 MDH1BQ5I0G3 518 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 TMEM35BQ8NCS4 154 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 FAF2Q96CS3 445 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 RBM15Q96T37 977 aaKnown RBP eCLIP9.66□□□□□ -0.862e-6■■■■□ 23.7
HPS4-208ENST00000464362 FAM49AQ9H0Q0 323 aaPredicted RBP9.66□□□□□ -0.86
HPS4-208ENST00000464362 TXLNGQ9NUQ3 528 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 RBAKQ9NYW8 714 aaPredicted RBP9.66□□□□□ -0.86
HPS4-208ENST00000464362 KCNG1Q9UIX4 513 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 JCADQ9P266 1359 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 DDTLA6NHG4 134 aaPredicted RBP9.66□□□□□ -0.86
HPS4-208ENST00000464362 CFLARO15519 480 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 NCF2P19878 526 aaPredicted RBP9.66□□□□□ -0.86
HPS4-208ENST00000464362 ERVK-9P63128 1117 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 BAATQ14032 418 aaPredicted RBP9.66□□□□□ -0.86
HPS4-208ENST00000464362 SMTNL2Q2TAL5 461 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 RAPH1Q70E73 1250 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 CBWD2Q8IUF1 395 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 SP8Q8IXZ3 490 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 SYT2Q8N9I0 419 aaPredicted RBP9.66□□□□□ -0.86
HPS4-208ENST00000464362 DAGLBQ8NCG7 672 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 AGR3Q8TD06 166 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 WRNIP1Q96S55 665 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 TMEM39BQ9GZU3 492 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 POLR3FQ9H1D9 316 aaPredicted RBP9.66□□□□□ -0.86
HPS4-208ENST00000464362 IKZF4Q9H2S9 585 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 SMYD3Q9H7B4 428 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 FNDC3AQ9Y2H6 1198 aaKnown RBP9.66□□□□□ -0.86
HPS4-208ENST00000464362 ESYT2A0FGR8 921 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 GYG2O15488 501 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 KLRC4O43908 158 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 DIAPH2O60879 1101 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 RTN2O75298 545 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 ARP10275 920 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 CASP5P51878 434 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 TPD52P55327 224 aaPredicted RBP9.66□□□□□ -0.86
HPS4-208ENST00000464362 SEMA3FQ13275 785 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 DHX34Q14147 1143 aaKnown RBP9.66□□□□□ -0.86
HPS4-208ENST00000464362 LRRC34Q8IZ02 419 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 DTX3LQ8TDB6 740 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 WNT8AQ9H1J5 351 aa9.66□□□□□ -0.86
HPS4-208ENST00000464362 MARCOQ9UEW3 520 aaPredicted RBP9.66□□□□□ -0.86
HPS4-208ENST00000464362 NT5C2P49902 561 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 EPHB1P54762 984 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 PSMC5P62195 406 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 P3H1Q32P28 736 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 FIGNQ5HY92 759 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 RHPN2Q8IUC4 686 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 RAPGEF5Q92565 580 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 DHX38Q92620 1227 aaKnown RBP9.65□□□□□ -0.86
HPS4-208ENST00000464362 MED15Q96RN5 788 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 SEMA4AQ9H3S1 761 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 DDX4Q9NQI0 724 aaKnown RBP9.65□□□□□ -0.86
HPS4-208ENST00000464362 AGO2Q9UKV8 859 aaKnown RBP9.65□□□□□ -0.86
HPS4-208ENST00000464362 RIC1Q4ADV7 1423 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 TISP43B9A030 160 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 ADAMTS3O15072 1205 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms