RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 DIS3Q9Y2L1 958 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-216ENST00000464275 H2AFZP0C0S5 128 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 IFI16Q16666 785 aaKnown RBP23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 ZNF792Q3KQV3 632 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 IER5Q5VY09 327 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 H2AFVQ71UI9 128 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 ARMCX2Q7L311 632 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 LNX1Q8TBB1 728 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 ATP8B4Q8TF62 1192 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 U2AF1L4Q8WU68 220 aaKnown RBP23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 TCP11Q8WWU5 503 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 FAM213AQ9BRX8 229 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 MORF4L1Q9UBU8 362 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 L1RE1Q9UN81 338 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 PCDHGC5Q9Y5F6 944 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 TARSL2A2RTX5 802 aaKnown RBP23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 SLC26A2P50443 739 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 GPC3P51654 580 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 OLIG1Q8TAK6 271 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 BRI3BPQ8WY22 251 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 CAPZA3Q96KX2 299 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 MMS19Q96T76 1030 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 PSD3Q9NYI0 1048 aa23.51■■□□□ 1.35
PDLIM2-216ENST00000464275 ADCY3O60266 1144 aa23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 PALMO75781 387 aa23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 TNFAIP3P21580 790 aa23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 CAPSQ13938 189 aa23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 PLCB4Q15147 1175 aa23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 ABRAQ8N0Z2 381 aa23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 FBXL13Q8NEE6 735 aa23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 CAGE1Q8TC20 777 aa23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 OSBPL9Q96SU4 736 aa23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 PNKPQ96T60 521 aa23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 SMARCAD1Q9H4L7 1026 aa23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 AGO2Q9UKV8 859 aaKnown RBP23.5■■□□□ 1.35
PDLIM2-216ENST00000464275 LRRN2O75325 713 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 LDHAP00338 332 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 MAP9Q49MG5 647 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 C2orf69Q8N8R5 385 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 PSPC1Q8WXF1 523 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 SEMA4DQ92854 862 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 COPS5Q92905 334 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 POP1Q99575 1024 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 A0A0A6YYK5 440 aaPredicted RBP23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 STRNO43815 780 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 MARK3P27448 753 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 MFAP3P55082 362 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 MKRN3Q13064 507 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 PSMD6Q15008 389 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 TRPM7Q96QT4 1865 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 JPH2Q9BR39 696 aaPredicted RBP23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 TLR10Q9BXR5 811 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 PDGFCQ9NRA1 345 aa23.49■■□□□ 1.35
PDLIM2-216ENST00000464275 ZSWIM8A7E2V4 1837 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 ZNF185O15231 689 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 ADORA2AP29274 412 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 TRIM50Q86XT4 487 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 GLYCTKQ8IVS8 523 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 RUBCNQ92622 972 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 EXOC4Q96A65 974 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 NT5C1BQ96P26 610 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 AGPAT1Q99943 283 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 VTA1Q9NP79 307 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 TOPORSQ9NS56 1045 aaPredicted RBP23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 RAB20Q9NX57 234 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 CALCOCO1Q9P1Z2 691 aa23.48■■□□□ 1.35
PDLIM2-216ENST00000464275 IGKV6-21A0A0C4DH24 114 aa23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 DLATP10515 647 aaKnown RBP23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 EFNA5P52803 228 aa23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 CLDN10P78369 228 aa23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 MXD4Q14582 209 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 SV2AQ7L0J3 742 aa23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 ZNF467Q7Z7K2 595 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 CREG2Q8IUH2 290 aa23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 PRPF31Q8WWY3 499 aaKnown RBP23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 VIPAS39Q9H9C1 493 aa23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 GRID2IPA4D2P6 1211 aa23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 ZBTB42B2RXF5 422 aa23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 TULP1O00294 542 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 NCK2O43639 380 aa23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 NFRKBQ6P4R8 1299 aa23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 ZNF572Q7Z3I7 529 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 NOA1Q8NC60 698 aaKnown RBP23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 TARS2Q9BW92 718 aaKnown RBP23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 IVNS1ABPQ9Y6Y0 642 aa23.47■■□□□ 1.35
PDLIM2-216ENST00000464275 POLR3GO15318 223 aaPredicted RBP23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 HBP1O60381 514 aa23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 ZBTB48P10074 688 aaPredicted RBP23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 GALCP54803 685 aa23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 VSNL1P62760 191 aa23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 DRP2Q13474 957 aa23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 LAMC2Q13753 1193 aa23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 MEI1Q5TIA1 1274 aa23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 SPRYD7Q5W111 196 aa23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 TAPT1Q6NXT6 567 aa23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 PPM1KQ8N3J5 372 aa23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 TAS1R2Q8TE23 839 aa23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 HAPLN2Q9GZV7 340 aa23.46■■□□□ 1.35
PDLIM2-216ENST00000464275 ABCB6Q9NP58 842 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms