RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 NCBP1Q09161 790 aaKnown RBP19.25■□□□□ 0.67
HMGN1-210ENST00000464078 AMHR2Q16671 573 aa19.25■□□□□ 0.67
HMGN1-210ENST00000464078 XKR9Q5GH70 373 aa19.25■□□□□ 0.67
HMGN1-210ENST00000464078 SLC44A3Q8N4M1 653 aa19.25■□□□□ 0.67
HMGN1-210ENST00000464078 RSAD2Q8WXG1 361 aa19.25■□□□□ 0.67
HMGN1-210ENST00000464078 NFKBIZQ9BYH8 718 aa19.25■□□□□ 0.67
HMGN1-210ENST00000464078 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.25■□□□□ 0.67
HMGN1-210ENST00000464078 RGL1Q9NZL6 768 aa19.25■□□□□ 0.67
HMGN1-210ENST00000464078 FNIP2Q9P278 1114 aa19.25■□□□□ 0.67
HMGN1-210ENST00000464078 GIT1Q9Y2X7 761 aa19.25■□□□□ 0.67
HMGN1-210ENST00000464078 FANCMQ8IYD8 2048 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 F8W810 466 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 CCNT1O60563 726 aaKnown RBP19.24■□□□□ 0.67
HMGN1-210ENST00000464078 CDKL5O76039 1030 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 LYPLA2O95372 231 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 CFHP08603 1231 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 CREMQ03060 361 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 MBTD1Q05BQ5 628 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 TFDP1Q14186 410 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 PHLDB3Q6NSJ2 640 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 POTEDQ86YR6 584 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 SLFN12Q8IYM2 578 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 HACE1Q8IYU2 909 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 GSTCDQ8NEC7 633 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 DYDC2Q96IM9 177 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 COLEC11Q9BWP8 271 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 NT5C3AQ9H0P0 336 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 HES2Q9Y543 173 aa19.24■□□□□ 0.67
HMGN1-210ENST00000464078 ANHXE9PGG2 379 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 INO80B-WBP1J3KQ70 363 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 LAMP2P13473 410 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 XBP1P17861 261 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 CYP4A11Q02928 519 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 HTR4Q13639 388 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 USP41Q3LFD5 358 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 NCAPH2Q6IBW4 605 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 FUT10Q6P4F1 479 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 LILRA6Q6PI73 481 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 CPB2Q96IY4 423 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 PRKD2Q9BZL6 878 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 NXF3Q9H4D5 531 aaKnown RBP19.23■□□□□ 0.67
HMGN1-210ENST00000464078 TBC1D17Q9HA65 648 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 MIOSQ9NXC5 875 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 ADAM28Q9UKQ2 775 aa19.23■□□□□ 0.67
HMGN1-210ENST00000464078 NCOR2Q9Y618 2525 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 ZBTB39O15060 712 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 TGM5O43548 720 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 DGAT1O75907 488 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 ARF4P18085 180 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-210ENST00000464078 ID4P47928 161 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 GRIK3Q13003 919 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 STK3Q13188 491 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 CAPSQ13938 189 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 CTTNQ14247 550 aaKnown RBP19.22■□□□□ 0.67
HMGN1-210ENST00000464078 PIK3AP1Q6ZUJ8 805 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 OXER1Q8TDS5 423 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 GPR62Q9BZJ7 368 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 TRIM6Q9C030 488 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-210ENST00000464078 ARHGEF3Q9NR81 526 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 SLC2A4RGQ9NR83 387 aa19.22■□□□□ 0.67
HMGN1-210ENST00000464078 ZFP37Q9Y6Q3 630 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-210ENST00000464078 SLITRK3O94933 977 aa19.21■□□□□ 0.67
HMGN1-210ENST00000464078 ARL2P36404 184 aa19.21■□□□□ 0.67
HMGN1-210ENST00000464078 SLC27A1Q6PCB7 646 aa19.21■□□□□ 0.67
HMGN1-210ENST00000464078 GPR152Q8TDT2 470 aa19.21■□□□□ 0.67
HMGN1-210ENST00000464078 ASAP3Q8TDY4 903 aa19.21■□□□□ 0.67
HMGN1-210ENST00000464078 B3GALT6Q96L58 329 aa19.21■□□□□ 0.67
HMGN1-210ENST00000464078 HSD17B14Q9BPX1 270 aa19.21■□□□□ 0.67
HMGN1-210ENST00000464078 PIDD1Q9HB75 910 aa19.21■□□□□ 0.67
HMGN1-210ENST00000464078 ANKEF1Q9NU02 776 aa19.21■□□□□ 0.67
HMGN1-210ENST00000464078 DLGAP2Q9P1A6 1054 aa19.21■□□□□ 0.67
HMGN1-210ENST00000464078 GPR179Q6PRD1 2367 aa19.21■□□□□ 0.67
HMGN1-210ENST00000464078 A0A1B0GUA9 196 aa19.2■□□□□ 0.66
HMGN1-210ENST00000464078 MARCH6O60337 910 aa19.2■□□□□ 0.66
HMGN1-210ENST00000464078 ZMYND10O75800 440 aa19.2■□□□□ 0.66
HMGN1-210ENST00000464078 LMNAP02545 664 aaKnown RBP19.2■□□□□ 0.66
HMGN1-210ENST00000464078 SPATA31D3P0C874 917 aa19.2■□□□□ 0.66
HMGN1-210ENST00000464078 RFX1P22670 979 aa19.2■□□□□ 0.66
HMGN1-210ENST00000464078 SCRN1Q12765 414 aa19.2■□□□□ 0.66
HMGN1-210ENST00000464078 SPATA31D4Q6ZUB0 917 aa19.2■□□□□ 0.66
HMGN1-210ENST00000464078 GET4Q7L5D6 327 aaPredicted RBP19.2■□□□□ 0.66
HMGN1-210ENST00000464078 PALB2Q86YC2 1186 aa19.2■□□□□ 0.66
HMGN1-210ENST00000464078 TPH2Q8IWU9 490 aa19.2■□□□□ 0.66
HMGN1-210ENST00000464078 LARP6Q9BRS8 491 aaKnown RBP19.2■□□□□ 0.66
HMGN1-210ENST00000464078 CA14Q9ULX7 337 aa19.2■□□□□ 0.66
HMGN1-210ENST00000464078 SF3B1O75533 1304 aaKnown RBP eCLIP19.2■□□□□ 0.664e-6■□□□□ 8.6
HMGN1-210ENST00000464078 MYH15Q9Y2K3 1946 aa19.19■□□□□ 0.66
HMGN1-210ENST00000464078 CACNA1IQ9P0X4 2223 aa19.19■□□□□ 0.66
HMGN1-210ENST00000464078 B4GALT5O43286 388 aa19.19■□□□□ 0.66
HMGN1-210ENST00000464078 BAG4O95429 457 aaKnown RBP19.19■□□□□ 0.66
HMGN1-210ENST00000464078 GLRA2P23416 452 aa19.19■□□□□ 0.66
HMGN1-210ENST00000464078 EARS2Q5JPH6 523 aaKnown RBP19.19■□□□□ 0.66
HMGN1-210ENST00000464078 POTEGQ6S5H5 508 aa19.19■□□□□ 0.66
HMGN1-210ENST00000464078 RIN2Q8WYP3 895 aaPredicted RBP19.19■□□□□ 0.66
HMGN1-210ENST00000464078 EIF2AK1Q9BQI3 630 aaKnown RBP19.19■□□□□ 0.66
HMGN1-210ENST00000464078 APOL6Q9BWW8 343 aa19.19■□□□□ 0.66
HMGN1-210ENST00000464078 GJB4Q9NTQ9 266 aa19.19■□□□□ 0.66
HMGN1-210ENST00000464078 FBXW11Q9UKB1 542 aa19.19■□□□□ 0.66
HMGN1-210ENST00000464078 STK25O00506 426 aa19.18■□□□□ 0.66
HMGN1-210ENST00000464078 MYBP10242 640 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms