RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 NUP98P52948 1817 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 LRG1P02750 347 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 LTFP02788 710 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 GJB1P08034 283 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 NFKB2Q00653 900 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 RAB33AQ14088 237 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 PRR31Q5SQ13 230 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 ZFYVE27Q5T4F4 411 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 BEND3Q5T5X7 828 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 TTLL5Q6EMB2 1281 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 TEPPQ6URK8 271 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 TMC5Q6UXY8 1006 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 SPATC1Q76KD6 591 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 ANKRD13AQ8IZ07 590 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 TXNDC5Q8NBS9 432 aaKnown RBP4.48□□□□□ -1.69
SCFD1-204ENST00000463622 OSBP2Q969R2 916 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 MEIS3Q99687 375 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 MYD88Q99836 296 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 AARSD1Q9BTE6 412 aaKnown RBP4.48□□□□□ -1.69
SCFD1-204ENST00000463622 STK31Q9BXU1 1019 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 EPB41L1Q9H4G0 881 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 DTLQ9NZJ0 730 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 CROTQ9UKG9 612 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 STXBP5LQ9Y2K9 1186 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 NR2E3Q9Y5X4 410 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 KIF16BQ96L93 1317 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 MED23Q9ULK4 1368 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 TLR2O60603 784 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 PDE8AO60658 829 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 PCCAP05165 728 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-204ENST00000463622 PABPC1P11940 636 aaKnown RBP4.47□□□□□ -1.69
SCFD1-204ENST00000463622 CCDC152Q4G0S7 254 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 ERICH6BQ5W0A0 696 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 SLC4A10Q6U841 1118 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 NSMFQ6X4W1 530 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 SKAP1Q86WV1 359 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 ANKRD18AQ8IVF6 992 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 SH3TC2Q8TF17 1288 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 CLEC4DQ8WXI8 215 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 DNAAF4Q8WXU2 420 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 KAZALD1Q96I82 304 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 HTATIP2Q9BUP3 242 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 TRIM55Q9BYV6 548 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 ZCCHC17Q9NP64 241 aaKnown RBP4.47□□□□□ -1.69
SCFD1-204ENST00000463622 GPR27Q9NS67 375 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 HYPKQ9NX55 129 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 LAMA3Q16787 3333 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 LRRC37AA6NMS7 1700 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 ZNF804BA4D1E1 1349 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 PTPRCP08575 1304 aa4.47□□□□□ -1.69
SCFD1-204ENST00000463622 NBPF7P0C2Y1 421 aaPredicted RBP4.46□□□□□ -1.69
SCFD1-204ENST00000463622 CAPN2P17655 700 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 CCT4P50991 539 aaKnown RBP4.46□□□□□ -1.69
SCFD1-204ENST00000463622 MLLT6P55198 1093 aaPredicted RBP4.46□□□□□ -1.69
SCFD1-204ENST00000463622 LACTBP83111 547 aaPredicted RBP4.46□□□□□ -1.69
SCFD1-204ENST00000463622 MVPQ14764 893 aaKnown RBP4.46□□□□□ -1.69
SCFD1-204ENST00000463622 DLGAP5Q15398 846 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 NAALADL2Q58DX5 795 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 EMC4Q5J8M3 183 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 EPHA10Q5JZY3 1008 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 C17orf99Q6UX52 265 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 KSR2Q6VAB6 950 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 GGNQ86UU5 652 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 ITPRIPQ8IWB1 547 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 FAM43AQ8N2R8 423 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 CCDC191Q8NCU4 936 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 ARHGAP45Q92619 1136 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 OPTNQ96CV9 577 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 PRMT6Q96LA8 375 aaPredicted RBP4.46□□□□□ -1.69
SCFD1-204ENST00000463622 GDF15Q99988 308 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 ARHGAP39Q9C0H5 1083 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 MTMR10Q9NXD2 777 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 PFDN2Q9UHV9 154 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 INVSQ9Y283 1065 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 TRAF6Q9Y4K3 522 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 SCN9AQ15858 1988 aa4.46□□□□□ -1.69
SCFD1-204ENST00000463622 SSC5DA1L4H1 1573 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 COL1A1P02452 1464 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-204ENST00000463622 ANKRD36CQ5JPF3 1778 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 NKRFO15226 690 aaKnown RBP eCLIP4.46□□□□□ -1.7
SCFD1-204ENST00000463622 STK10O94804 968 aaKnown RBP4.46□□□□□ -1.7
SCFD1-204ENST00000463622 CTGFP29279 349 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 FKBP1AP62942 108 aaKnown RBP4.46□□□□□ -1.7
SCFD1-204ENST00000463622 RASA3Q14644 834 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 C15orf52Q6ZUT6 534 aaKnown RBP4.46□□□□□ -1.7
SCFD1-204ENST00000463622 CERS5Q8N5B7 392 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 TTLL11Q8NHH1 800 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 SGSM3Q96HU1 749 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 KRTAP17-1Q9BYP8 105 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 API5Q9BZZ5 524 aaKnown RBP4.46□□□□□ -1.7
SCFD1-204ENST00000463622 USP44Q9H0E7 712 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 SMOC1Q9H4F8 434 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 SLC6A20Q9NP91 592 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 ASH2LQ9UBL3 628 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 STAP2Q9UGK3 403 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 SRRDQ9UH36 339 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 PCDHAC2Q9Y5I4 1007 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 AOX1Q06278 1338 aa4.46□□□□□ -1.7
SCFD1-204ENST00000463622 TRAV20A0A0B4J274 112 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 CCL15-CCL14A0A0B4J2E2 113 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms