RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 MKRN4PQ13434 485 aaPredicted RBP11□□□□□ -0.65
MSH5-211ENST00000463144 WDR78Q5VTH9 848 aa11□□□□□ -0.65
MSH5-211ENST00000463144 C15orf39Q6ZRI6 1047 aa11□□□□□ -0.65
MSH5-211ENST00000463144 SLFN11Q7Z7L1 901 aa11□□□□□ -0.65
MSH5-211ENST00000463144 FAM71AQ8IYT1 594 aa11□□□□□ -0.65
MSH5-211ENST00000463144 PPM1KQ8N3J5 372 aa11□□□□□ -0.65
MSH5-211ENST00000463144 DEPTORQ8TB45 409 aa11□□□□□ -0.65
MSH5-211ENST00000463144 PSPC1Q8WXF1 523 aaKnown RBP11□□□□□ -0.65
MSH5-211ENST00000463144 TATDN2Q93075 761 aa11□□□□□ -0.65
MSH5-211ENST00000463144 VTI1AQ96AJ9 217 aa11□□□□□ -0.65
MSH5-211ENST00000463144 TARS2Q9BW92 718 aaKnown RBP11□□□□□ -0.65
MSH5-211ENST00000463144 ACP6Q9NPH0 428 aa11□□□□□ -0.65
MSH5-211ENST00000463144 RAB20Q9NX57 234 aa11□□□□□ -0.65
MSH5-211ENST00000463144 L1RE1Q9UN81 338 aa11□□□□□ -0.65
MSH5-211ENST00000463144 ZNF233A6NK53 670 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 K7ERI5 159 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 TMEM253P0C7T8 217 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 CHRNB2P17787 502 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 MARK3P27448 753 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 GTF2H1P32780 548 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 ABCD1P33897 745 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 CLDN10P78369 228 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 STRN3Q13033 797 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 ZBTB41Q5SVQ8 909 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 MAP1SQ66K74 1059 aaPredicted RBP10.99□□□□□ -0.65
MSH5-211ENST00000463144 FMNL3Q8IVF7 1028 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 KRT222Q8N1A0 295 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 FBXL13Q8NEE6 735 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 PRPF31Q8WWY3 499 aaKnown RBP10.99□□□□□ -0.65
MSH5-211ENST00000463144 SHC3Q92529 594 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 ARHGEF26Q96DR7 871 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 OSGEPQ9NPF4 335 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 KCNG1Q9UIX4 513 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 NOCTQ9UK39 431 aaKnown RBP10.99□□□□□ -0.65
MSH5-211ENST00000463144 STXBP5LQ9Y2K9 1186 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 NCANO14594 1321 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 PTPRJQ12913 1337 aa10.99□□□□□ -0.65
MSH5-211ENST00000463144 TARSL2A2RTX5 802 aaKnown RBP10.98□□□□□ -0.65
MSH5-211ENST00000463144 MAP2K7O14733 419 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 ADCY3O60266 1144 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 ZMYND10O75800 440 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 ACOT2P49753 483 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 ENPEPQ07075 957 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 PTPROQ16827 1216 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 LMBRD2Q68DH5 695 aaPredicted RBP10.98□□□□□ -0.65
MSH5-211ENST00000463144 KCNV1Q6PIU1 500 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 NOP9Q86U38 636 aaKnown RBP10.98□□□□□ -0.65
MSH5-211ENST00000463144 SHCBP1Q8NEM2 672 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 SLC35G2Q8TBE7 412 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 HDAC7Q8WUI4 952 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 PCDHB18PQ96TA0 734 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 LRRC1Q9BTT6 524 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 PI4K2AQ9BTU6 479 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 TMEM134Q9H6X4 195 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 ZNF408Q9H9D4 720 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 AGO2Q9UKV8 859 aaKnown RBP10.98□□□□□ -0.65
MSH5-211ENST00000463144 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 ADGRA2Q96PE1 1338 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 PLXNA1Q9UIW2 1896 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 IQCA1LA6NCM1 817 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 CYP26A1O43174 497 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 KIF4AO95239 1232 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 ABCB4P21439 1286 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 USP8P40818 1118 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 MATR3P43243 847 aaKnown RBP eCLIP10.98□□□□□ -0.65
MSH5-211ENST00000463144 PSMD6Q15008 389 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 PLCB4Q15147 1175 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 RPS6KA1Q15418 735 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 IFI16Q16666 785 aaKnown RBP10.98□□□□□ -0.65
MSH5-211ENST00000463144 CCDC181Q5TID7 509 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 DHX37Q8IY37 1157 aaKnown RBP10.98□□□□□ -0.65
MSH5-211ENST00000463144 RPUSD2Q8IZ73 545 aaKnown RBP10.98□□□□□ -0.65
MSH5-211ENST00000463144 EPS8L1Q8TE68 723 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 BBXQ8WY36 941 aaPredicted RBP10.98□□□□□ -0.65
MSH5-211ENST00000463144 GLG1Q92896 1179 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 SPATA33Q96N06 139 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 NT5C1BQ96P26 610 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 MPHOSPH6Q99547 160 aaKnown RBP10.98□□□□□ -0.65
MSH5-211ENST00000463144 HINFPQ9BQA5 517 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 THAP2Q9H0W7 228 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 ISCUQ9H1K1 167 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 AZI2Q9H6S1 392 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 KIAA1586Q9HCI6 787 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 ST7Q9NRC1 585 aa10.98□□□□□ -0.65
MSH5-211ENST00000463144 RBM12Q9NTZ6 932 aaKnown RBP10.98□□□□□ -0.65
MSH5-211ENST00000463144 SEPT11Q9NVA2 429 aaKnown RBP10.98□□□□□ -0.65
MSH5-211ENST00000463144 ZC3H4Q9UPT8 1303 aaKnown RBP10.97□□□□□ -0.65
MSH5-211ENST00000463144 A0A0B4J269 797 aa10.97□□□□□ -0.65
MSH5-211ENST00000463144 IGKV6-21A0A0C4DH24 114 aa10.97□□□□□ -0.65
MSH5-211ENST00000463144 C4BPAP04003 597 aaKnown RBP10.97□□□□□ -0.65
MSH5-211ENST00000463144 TUBBP07437 444 aa10.97□□□□□ -0.65
MSH5-211ENST00000463144 TXNP10599 105 aaKnown RBP10.97□□□□□ -0.65
MSH5-211ENST00000463144 PAFAH1B1P43034 410 aa10.97□□□□□ -0.65
MSH5-211ENST00000463144 MFAP3P55082 362 aa10.97□□□□□ -0.65
MSH5-211ENST00000463144 MRPS25P82663 173 aaKnown RBP10.97□□□□□ -0.65
MSH5-211ENST00000463144 MKRN3Q13064 507 aaKnown RBP10.97□□□□□ -0.65
MSH5-211ENST00000463144 PLPPR4Q7Z2D5 763 aa10.97□□□□□ -0.65
MSH5-211ENST00000463144 PNMA8AQ86V59 439 aaPredicted RBP10.97□□□□□ -0.65
MSH5-211ENST00000463144 SLC47A2Q86VL8 602 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms