RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 CEP120Q8N960 986 aa22.19■■□□□ 1.14
NUP43-205ENST00000463048 SMARCE1Q969G3 411 aa22.19■■□□□ 1.14
NUP43-205ENST00000463048 TIFAQ96CG3 184 aa22.19■■□□□ 1.14
NUP43-205ENST00000463048 PGBD4Q96DM1 585 aa22.19■■□□□ 1.14
NUP43-205ENST00000463048 TRAIPQ9BWF2 469 aa22.19■■□□□ 1.14
NUP43-205ENST00000463048 STRA6Q9BX79 667 aa22.19■■□□□ 1.14
NUP43-205ENST00000463048 CERS4Q9HA82 394 aa22.19■■□□□ 1.14
NUP43-205ENST00000463048 HCSTQ9UBK5 93 aa22.19■■□□□ 1.14
NUP43-205ENST00000463048 MTUS1Q9ULD2 1270 aa22.19■■□□□ 1.14
NUP43-205ENST00000463048 CLDN3O15551 220 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 ZNF623O75123 536 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 TOM1L1O75674 476 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 EOMESO95936 686 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 HTRA4P83105 476 aaPredicted RBP22.18■■□□□ 1.14
NUP43-205ENST00000463048 DCAF4L1Q3SXM0 396 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 ZPBP2Q6X784 338 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 FAM43BQ6ZT52 329 aaPredicted RBP22.18■■□□□ 1.14
NUP43-205ENST00000463048 MRPL10Q7Z7H8 261 aaKnown RBP22.18■■□□□ 1.14
NUP43-205ENST00000463048 NOC3LQ8WTT2 800 aaKnown RBP22.18■■□□□ 1.14
NUP43-205ENST00000463048 HVCN1Q96D96 273 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 HAPLN2Q9GZV7 340 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 PTPRHQ9HD43 1115 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 RNF216Q9NWF9 866 aaPredicted RBP22.18■■□□□ 1.14
NUP43-205ENST00000463048 EXOC7Q9UPT5 735 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 MAPK8IP1Q9UQF2 711 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 PCDHA5Q9Y5H7 936 aa22.18■■□□□ 1.14
NUP43-205ENST00000463048 LAMA2P24043 3122 aaKnown RBP22.17■■□□□ 1.14
NUP43-205ENST00000463048 SMC2O95347 1197 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 ABCD1P33897 745 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 AFF1P51825 1210 aaKnown RBP22.17■■□□□ 1.14
NUP43-205ENST00000463048 ALCAMQ13740 583 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 NOLC1Q14978 699 aaKnown RBP eCLIP22.17■■□□□ 1.14
NUP43-205ENST00000463048 PPP2R2DQ66LE6 453 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 APBB1IPQ7Z5R6 666 aaPredicted RBP22.17■■□□□ 1.14
NUP43-205ENST00000463048 TMEM192Q8IY95 271 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 SMYD4Q8IYR2 804 aaPredicted RBP22.17■■□□□ 1.14
NUP43-205ENST00000463048 HACE1Q8IYU2 909 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 KIAA0895Q8NCT3 520 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 GPT2Q8TD30 523 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 SCFD1Q8WVM8 642 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 CASD1Q96PB1 797 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 RSAD1Q9HA92 442 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 SLC28A3Q9HAS3 691 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 COL4A6Q14031 1691 aa22.17■■□□□ 1.14
NUP43-205ENST00000463048 BIN1O00499 593 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 ABLIM1O14639 778 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 SCP2P22307 547 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 PROZP22891 400 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 HOXD13P35453 343 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 MLH1P40692 756 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 SPOUT1Q5T280 376 aaKnown RBP22.16■■□□□ 1.14
NUP43-205ENST00000463048 GLB1LQ6UWU2 654 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 EPM2AIP1Q7L775 607 aaPredicted RBP22.16■■□□□ 1.14
NUP43-205ENST00000463048 FIBCD1Q8N539 461 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 ZNF689Q96CS4 500 aaPredicted RBP22.16■■□□□ 1.14
NUP43-205ENST00000463048 ZFP42Q96MM3 310 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 FAM161BQ96MY7 647 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 GAD1Q99259 594 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 MSTO1Q9BUK6 570 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 TMEM117Q9H0C3 514 aa22.16■■□□□ 1.14
NUP43-205ENST00000463048 FNDC1Q4ZHG4 1894 aaPredicted RBP22.15■■□□□ 1.14
NUP43-205ENST00000463048 LINC01553A4QN01 128 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 EIF3DO15371 548 aaKnown RBP eCLIP22.15■■□□□ 1.14
NUP43-205ENST00000463048 HOXA2O43364 376 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 OFD1O75665 1012 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 RECQL4O94761 1208 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 RHOBTB3O94955 611 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 POMCP01189 267 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 PIGRP01833 764 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 MCF2P10911 925 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 MCM4P33991 863 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 PSMD2Q13200 908 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 ZNF507Q8TCN5 953 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 POMGNT1Q8WZA1 660 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 GBP3Q9H0R5 595 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 CXCL16Q9H2A7 254 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 PCIF1Q9H4Z3 704 aa22.15■■□□□ 1.14
NUP43-205ENST00000463048 RC3H2Q9HBD1 1191 aaKnown RBP22.15■■□□□ 1.14
NUP43-205ENST00000463048 MRPL42Q9Y6G3 142 aaKnown RBP22.15■■□□□ 1.14
NUP43-205ENST00000463048 ZMYM2Q9UBW7 1377 aa22.14■■□□□ 1.14
NUP43-205ENST00000463048 TAP1Q03518 808 aa22.14■■□□□ 1.13
NUP43-205ENST00000463048 MCL1Q07820 350 aa22.14■■□□□ 1.13
NUP43-205ENST00000463048 KCNB1Q14721 858 aa22.14■■□□□ 1.13
NUP43-205ENST00000463048 NOMO2Q5JPE7 1267 aa22.14■■□□□ 1.13
NUP43-205ENST00000463048 ZBTB41Q5SVQ8 909 aa22.14■■□□□ 1.13
NUP43-205ENST00000463048 CMTR2Q8IYT2 770 aaKnown RBP22.14■■□□□ 1.13
NUP43-205ENST00000463048 KCNN1Q92952 543 aa22.14■■□□□ 1.13
NUP43-205ENST00000463048 CCDC94Q9BW85 323 aaPredicted RBP22.14■■□□□ 1.13
NUP43-205ENST00000463048 CLSTN2Q9H4D0 955 aa22.14■■□□□ 1.13
NUP43-205ENST00000463048 TMEM206Q9H813 350 aa22.14■■□□□ 1.13
NUP43-205ENST00000463048 RMND1Q9NWS8 449 aa22.14■■□□□ 1.13
NUP43-205ENST00000463048 ARL5CA6NH57 179 aa22.13■■□□□ 1.13
NUP43-205ENST00000463048 TNFSF9P41273 254 aa22.13■■□□□ 1.13
NUP43-205ENST00000463048 SCNN1GP51170 649 aa22.13■■□□□ 1.13
NUP43-205ENST00000463048 RNASELQ05823 741 aaKnown RBP22.13■■□□□ 1.13
NUP43-205ENST00000463048 LRRC55Q6ZSA7 311 aa22.13■■□□□ 1.13
NUP43-205ENST00000463048 ZSWIM2Q8NEG5 633 aa22.13■■□□□ 1.13
NUP43-205ENST00000463048 URGCPQ8TCY9 931 aa22.13■■□□□ 1.13
NUP43-205ENST00000463048 SP7Q8TDD2 431 aaPredicted RBP22.13■■□□□ 1.13
NUP43-205ENST00000463048 SAAL1Q96ER3 474 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms