RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 BORCS6Q96GS4 357 aa13.36□□□□□ -0.27
HDAC4-208ENST00000463007 ECT2Q9H8V3 914 aa13.36□□□□□ -0.27
HDAC4-208ENST00000463007 C21orf2O43822 256 aa13.36□□□□□ -0.27
HDAC4-208ENST00000463007 CFBP00751 764 aa13.36□□□□□ -0.27
HDAC4-208ENST00000463007 CHRM1P11229 460 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-208ENST00000463007 GCLMP48507 274 aa13.36□□□□□ -0.27
HDAC4-208ENST00000463007 ERFP50548 548 aa13.36□□□□□ -0.27
HDAC4-208ENST00000463007 GHRHRQ02643 423 aa13.36□□□□□ -0.27
HDAC4-208ENST00000463007 FRMD5Q7Z6J6 570 aa13.36□□□□□ -0.27
HDAC4-208ENST00000463007 RSRC1Q96IZ7 334 aaKnown RBP13.36□□□□□ -0.27
HDAC4-208ENST00000463007 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.36□□□□□ -0.274e-9■■■■■ 42.5
HDAC4-208ENST00000463007 A0A1B0GUA9 196 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 GOLGA8IPA6NC78 632 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 GOLGA8JA6NMD2 632 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 FERP16591 822 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 DLG4P78352 724 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 NAIF1Q69YI7 327 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-208ENST00000463007 ZDHHC14Q8IZN3 488 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 EIF2AK1Q9BQI3 630 aaKnown RBP13.35□□□□□ -0.27
HDAC4-208ENST00000463007 EPB41L4BQ9H329 900 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 OLFML3Q9NRN5 406 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 MTRF1LQ9UGC7 380 aaKnown RBP13.35□□□□□ -0.27
HDAC4-208ENST00000463007 NENFQ9UMX5 172 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 GSTTP1A0A1W2PQM5 241 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 H0Y3Z8 333 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 KIAA0391O15091 583 aaKnown RBP13.35□□□□□ -0.27
HDAC4-208ENST00000463007 PIAS1O75925 651 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 EYA4O95677 639 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 PYGMP11217 842 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 COMTP21964 271 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 ALDH5A1P51649 535 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-208ENST00000463007 PTENP60484 403 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 MAPK7Q13164 816 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 KYNUQ16719 465 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 C10orf76Q5T2E6 689 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 TAB3Q8N5C8 712 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-208ENST00000463007 ERMNQ8TAM6 284 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 ARHGEF2Q92974 986 aaKnown RBP13.35□□□□□ -0.27
HDAC4-208ENST00000463007 ZNF317Q96PQ6 595 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-208ENST00000463007 HEMGNQ9BXL5 484 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 PDGFDQ9GZP0 370 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-208ENST00000463007 ADAM7Q9H2U9 754 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 RASAL2Q9UJF2 1139 aa13.35□□□□□ -0.27
HDAC4-208ENST00000463007 TMEM120BA0PK00 339 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 DDX3YO15523 660 aaKnown RBP13.34□□□□□ -0.27
HDAC4-208ENST00000463007 PPFIA2O75334 1257 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 FMO5P49326 533 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 PLCB4Q15147 1175 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 NFIL3Q16649 462 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 ODR4Q5SWX8 454 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 DUPD1Q68J44 220 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 ZSWIM2Q8NEG5 633 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 OLIG1Q8TAK6 271 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 SPDL1Q96EA4 605 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 STXBP5LQ9Y2K9 1186 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 TCP10L2B9ZVM9 353 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 PDXKO00764 312 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 TGFB1I1O43294 461 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 SLITRK3O94933 977 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 SLC8A1P32418 973 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 XRCC4Q13426 336 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 DRP2Q13474 957 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 ZYXQ15942 572 aaKnown RBP13.34□□□□□ -0.27
HDAC4-208ENST00000463007 ZDHHC24Q6UX98 284 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 C1orf186Q6ZWK4 172 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 FAM178BQ8IXR5 827 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 SRRM1Q8IYB3 904 aaKnown RBP13.34□□□□□ -0.27
HDAC4-208ENST00000463007 PPM1KQ8N3J5 372 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 PRELID2Q8N945 189 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 ATXN2LQ8WWM7 1075 aaKnown RBP13.34□□□□□ -0.27
HDAC4-208ENST00000463007 CCDC127Q96BQ5 260 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 CNOT10Q9H9A5 744 aaKnown RBP13.34□□□□□ -0.27
HDAC4-208ENST00000463007 TUFT1Q9NNX1 390 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 TYW1Q9NV66 732 aaKnown RBP13.34□□□□□ -0.27
HDAC4-208ENST00000463007 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-208ENST00000463007 WRAP73Q9P2S5 460 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-208ENST00000463007 TRPC6Q9Y210 931 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 FRMD4BQ9Y2L6 1034 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 RPTORQ8N122 1335 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 ATXN2Q99700 1313 aaKnown RBP13.34□□□□□ -0.27
HDAC4-208ENST00000463007 RLFQ13129 1914 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 ENO4A6NNW6 628 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 CLDN3O15551 220 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 GCKP35557 465 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 ZNF131P52739 623 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 CALCOCO2Q13137 446 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 FAM182AQ5T1J6 154 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 EMC10Q5UCC4 262 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 PHLDB3Q6NSJ2 640 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 CYP4F22Q6NT55 531 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 FAM83AQ86UY5 434 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 RPUSD2Q8IZ73 545 aaKnown RBP13.34□□□□□ -0.27
HDAC4-208ENST00000463007 PAGR1Q9BTK6 254 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 ARHGEF10LQ9HCE6 1279 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 ZDHHC18Q9NUE0 388 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 ZNF536O15090 1300 aa13.34□□□□□ -0.27
HDAC4-208ENST00000463007 MYH11P35749 1972 aa13.33□□□□□ -0.28
HDAC4-208ENST00000463007 CLRN2A0PK11 232 aa13.33□□□□□ -0.28
HDAC4-208ENST00000463007 KRT16P08779 473 aa13.33□□□□□ -0.28
HDAC4-208ENST00000463007 PSMC2P35998 433 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms