RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 ALG6Q9Y672 507 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 RNF103-CHMP3A0A140T963 221 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 CES2O00748 559 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 CLDN3O15551 220 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 ALAS1P13196 640 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 MAGEA4P43358 317 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 TAF1BQ53T94 588 aaPredicted RBP16.75■□□□□ 0.27
SMC4-204ENST00000462787 CNOT7Q9UIV1 285 aaKnown RBP16.75■□□□□ 0.27
SMC4-204ENST00000462787 TLR3O15455 904 aaKnown RBP16.75■□□□□ 0.27
SMC4-204ENST00000462787 KDM1AO60341 852 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 ESRRBO95718 433 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 KRT7P08729 469 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 RFX5P48382 616 aaPredicted RBP16.75■□□□□ 0.27
SMC4-204ENST00000462787 TTLL12Q14166 644 aaPredicted RBP16.75■□□□□ 0.27
SMC4-204ENST00000462787 KLHDC7AQ5VTJ3 777 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 CCDC24Q8N4L8 307 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 ING2Q9H160 280 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 EHD4Q9H223 541 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 SENP2Q9HC62 589 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 HAO1Q9UJM8 370 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 NEU2Q9Y3R4 380 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 POTEFA5A3E0 1075 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 POTEIP0CG38 1075 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 TOB1P50616 345 aaPredicted RBP16.75■□□□□ 0.27
SMC4-204ENST00000462787 DNAJC3Q13217 504 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 SYDE2Q5VT97 1194 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 POTEGQ6S5H5 508 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 POTEEQ6S8J3 1075 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 ARHGAP22Q7Z5H3 698 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 EPS8L3Q8TE67 593 aaKnown RBP16.75■□□□□ 0.27
SMC4-204ENST00000462787 RIOK1Q9BRS2 568 aaKnown RBP16.75■□□□□ 0.27
SMC4-204ENST00000462787 KIAA1586Q9HCI6 787 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 ALG13Q9NP73 1137 aaKnown RBP16.75■□□□□ 0.27
SMC4-204ENST00000462787 BSDC1Q9NW68 430 aaPredicted RBP16.75■□□□□ 0.27
SMC4-204ENST00000462787 SNX5Q9Y5X3 404 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 A0A0G2JLW4 131 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 USP17L5A8MUK1 530 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 CYTH1Q15438 398 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 P3H1Q32P28 736 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 TTMPQ5BVD1 217 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 ATXN2LQ8WWM7 1075 aaKnown RBP16.75■□□□□ 0.27
SMC4-204ENST00000462787 NAGPAQ9UK23 515 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 STRIP2Q9ULQ0 834 aa16.75■□□□□ 0.27
SMC4-204ENST00000462787 A0A087X0T9 212 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 FAM228BP0C875 321 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 ZNF844Q08AG5 666 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 LRRC36Q1X8D7 754 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 LVRNQ6Q4G3 990 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 ITGA8P53708 1063 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 SUPT20HQ8NEM7 779 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 HDAC7Q8WUI4 952 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 SLC13A1Q9BZW2 595 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 ARHGAP20Q9P2F6 1191 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 LRCH1Q9Y2L9 728 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 ZHX2Q9Y6X8 837 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 ZBBXA8MT70 800 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 TRIM49P0CI25 452 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 TRIM49CP0CI26 452 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 BMP3P12645 472 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 TMED10P49755 219 aaKnown RBP16.74■□□□□ 0.27
SMC4-204ENST00000462787 SURF1Q15526 300 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 CREG2Q8IUH2 290 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 CCNYQ8ND76 341 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 GLG1Q92896 1179 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 NRBP2Q9NSY0 501 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 SLC9A1P19634 815 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 CENPCQ03188 943 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 TRIM28Q13263 835 aaKnown RBP16.74■□□□□ 0.27
SMC4-204ENST00000462787 SPDYCQ5MJ68 293 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 NLRP9Q7RTR0 991 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 TSEN2Q8NCE0 465 aaKnown RBP16.74■□□□□ 0.27
SMC4-204ENST00000462787 RNF169Q8NCN4 708 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 DDI1Q8WTU0 396 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 CEP170P1Q96L14 293 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 MANSC1Q9H8J5 431 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 ADA2Q9NZK5 511 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 CCPG1Q9ULG6 757 aa16.74■□□□□ 0.27
SMC4-204ENST00000462787 RHPN2Q8IUC4 686 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 FOXP4Q8IVH2 680 aaPredicted RBP16.73■□□□□ 0.27
SMC4-204ENST00000462787 RHBDL2Q9NX52 303 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 CCNL1Q9UK58 526 aaPredicted RBP16.73■□□□□ 0.27
SMC4-204ENST00000462787 COMTP21964 271 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 PTPN4P29074 926 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 OCRLQ01968 901 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 KCNMA1Q12791 1236 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 ADRM1Q16186 407 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 RBBP8NLQ8NC74 664 aaPredicted RBP16.73■□□□□ 0.27
SMC4-204ENST00000462787 CENPTQ96BT3 561 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 MAML3Q96JK9 1138 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 FIS1Q9Y3D6 152 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 EMSYQ7Z589 1322 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 DLC1Q96QB1 1528 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 PFDN6O15212 129 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 FMO5P49326 533 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 INPP1P49441 399 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 PRELPP51888 382 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 UBXN2AP68543 259 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 MORF4L2Q15014 288 aa16.73■□□□□ 0.27
SMC4-204ENST00000462787 SLFN12LQ6IEE8 588 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms