RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 PPP2R2AP63151 447 aa18.22■□□□□ 0.51
ACTB-207ENST00000462494 FMO1Q01740 532 aa18.22■□□□□ 0.51
ACTB-207ENST00000462494 AGBL2Q5U5Z8 902 aa18.22■□□□□ 0.51
ACTB-207ENST00000462494 PRELID2Q8N945 189 aa18.22■□□□□ 0.51
ACTB-207ENST00000462494 MTMR14Q8NCE2 650 aa18.22■□□□□ 0.51
ACTB-207ENST00000462494 TMEM161BQ8NDZ6 487 aa18.22■□□□□ 0.51
ACTB-207ENST00000462494 AGBL3Q8NEM8 1001 aa18.22■□□□□ 0.51
ACTB-207ENST00000462494 ZNF564Q8TBZ8 553 aaPredicted RBP18.22■□□□□ 0.51
ACTB-207ENST00000462494 ZNF653Q96CK0 615 aa18.22■□□□□ 0.51
ACTB-207ENST00000462494 TIPINQ9BVW5 301 aa18.22■□□□□ 0.51
ACTB-207ENST00000462494 PDGFDQ9GZP0 370 aaPredicted RBP18.22■□□□□ 0.51
ACTB-207ENST00000462494 KMT5AQ9NQR1 393 aa18.22■□□□□ 0.51
ACTB-207ENST00000462494 CNOT8Q9UFF9 292 aaKnown RBP18.22■□□□□ 0.51
ACTB-207ENST00000462494 TRPC6Q9Y210 931 aa18.22■□□□□ 0.51
ACTB-207ENST00000462494 KIAA0391O15091 583 aaKnown RBP18.21■□□□□ 0.51
ACTB-207ENST00000462494 DLATP10515 647 aaKnown RBP18.21■□□□□ 0.51
ACTB-207ENST00000462494 GZMAP12544 262 aa18.21■□□□□ 0.51
ACTB-207ENST00000462494 CYP11B1P15538 503 aa18.21■□□□□ 0.51
ACTB-207ENST00000462494 CHRNA3P32297 505 aa18.21■□□□□ 0.51
ACTB-207ENST00000462494 SNRPFP62306 86 aaKnown RBP18.21■□□□□ 0.51
ACTB-207ENST00000462494 FBXO25Q8TCJ0 367 aa18.21■□□□□ 0.51
ACTB-207ENST00000462494 PARD3BQ8TEW8 1205 aa18.21■□□□□ 0.51
ACTB-207ENST00000462494 RPS6KC1Q96S38 1066 aa18.21■□□□□ 0.51
ACTB-207ENST00000462494 PDCD2LQ9BRP1 358 aa18.21■□□□□ 0.51
ACTB-207ENST00000462494 MYOZ2Q9NPC6 264 aa18.21■□□□□ 0.51
ACTB-207ENST00000462494 PXMP2Q9NR77 195 aa18.21■□□□□ 0.51
ACTB-207ENST00000462494 STK32BQ9NY57 414 aa18.21■□□□□ 0.51
ACTB-207ENST00000462494 PEX5P50542 639 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 PDE6CP51160 858 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 PMS2P54278 862 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 MAP3K10Q02779 954 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 MTMR2Q13614 643 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 LLGL1Q15334 1064 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 TTC27Q6P3X3 843 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 CCDC137Q6PK04 289 aaKnown RBP18.21■□□□□ 0.5
ACTB-207ENST00000462494 ANO5Q75V66 913 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 ZDHHC14Q8IZN3 488 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 TAS1R2Q8TE23 839 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 POMGNT1Q8WZA1 660 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 SHC3Q92529 594 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 DHX38Q92620 1227 aaKnown RBP18.21■□□□□ 0.5
ACTB-207ENST00000462494 WNT8AQ9H1J5 351 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 SLC12A6Q9UHW9 1150 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 PTPN22Q9Y2R2 807 aa18.21■□□□□ 0.5
ACTB-207ENST00000462494 TCRBV7S2A1N4TA0A589 114 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 FAM107AO95990 144 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 SHBGP04278 402 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 SFNP31947 248 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 PTGIRP43119 386 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 KRT76Q01546 638 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 CXCL9Q07325 125 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 TCEAL1Q15170 157 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 MAP4K3Q8IVH8 894 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 OTUD6BQ8N6M0 293 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 SLC17A8Q8NDX2 589 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 NT5C1BQ96P26 610 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 TXLNGYQ9BZA5 131 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 KIAA1683Q9H0B3 1180 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 RPAP3Q9H6T3 665 aaPredicted RBP18.2■□□□□ 0.5
ACTB-207ENST00000462494 TMEM8AQ9HCN3 771 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 ANKEF1Q9NU02 776 aa18.2■□□□□ 0.5
ACTB-207ENST00000462494 ZBED4O75132 1171 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 CALCAP01258 141 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 KRT5P13647 590 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 DPEP1P16444 411 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 HSPA6P17066 643 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 CTNNA2P26232 953 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 SP4Q02446 784 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 GHRHRQ02643 423 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 ZDHHC24Q6UX98 284 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 MICALCLQ6ZW33 695 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 CCDC105Q8IYK2 499 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 FBXL13Q8NEE6 735 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 HELQQ8TDG4 1101 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 BSNDQ8WZ55 320 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 CEP170P1Q96L14 293 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.19■□□□□ 0.53e-20■■■■□ 20.1
ACTB-207ENST00000462494 GMNCA6NCL1 334 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 SMIM23A6NLE4 172 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 PMM2O15305 246 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 CAND2O75155 1236 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 RPL21P46778 160 aaKnown RBP18.19■□□□□ 0.5
ACTB-207ENST00000462494 EIF3BP55884 814 aaKnown RBP18.19■□□□□ 0.5
ACTB-207ENST00000462494 EN1Q05925 392 aaPredicted RBP18.19■□□□□ 0.5
ACTB-207ENST00000462494 DENND2CQ68D51 928 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 NLRX1Q86UT6 975 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 SPATS2Q86XZ4 545 aaKnown RBP18.19■□□□□ 0.5
ACTB-207ENST00000462494 TATDN2Q93075 761 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 FAM84AQ96KN4 292 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 PI4K2AQ9BTU6 479 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 RAB20Q9NX57 234 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 MAP3K20Q9NYL2 800 aaKnown RBP18.19■□□□□ 0.5
ACTB-207ENST00000462494 GABBR1Q9UBS5 961 aa18.19■□□□□ 0.5
ACTB-207ENST00000462494 TLDC2A0PJX2 215 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 MEFVO15553 781 aaPredicted RBP18.18■□□□□ 0.5
ACTB-207ENST00000462494 SORBS3O60504 671 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 CDR2Q01850 454 aa18.18■□□□□ 0.5
ACTB-207ENST00000462494 BAATQ14032 418 aaPredicted RBP18.18■□□□□ 0.5
ACTB-207ENST00000462494 RNF187Q5TA31 235 aaPredicted RBP18.18■□□□□ 0.5
ACTB-207ENST00000462494 CD101Q93033 1021 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms