RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 ARL5CA6NH57 179 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 H3BQ06 376 aaPredicted RBP9.17□□□□□ -0.94
PGBD2-203ENST00000462488 K7ENM7 598 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 PER2O15055 1255 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 SRGAP2BP0DMP2 458 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 IDEP14735 1019 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 DNAJB1P25685 340 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 IRS1P35568 1242 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 DDIT3P35638 169 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 ME1P48163 572 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 SCNN1GP51170 649 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 ERVFC1P60507 584 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 OSTNP61366 133 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 CLUL1Q15846 466 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 FAM187BQ17R55 369 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 DCAF4L1Q3SXM0 396 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 PDE12Q6L8Q7 609 aaKnown RBP9.17□□□□□ -0.94
PGBD2-203ENST00000462488 KIAA1841Q6NSI8 718 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 USP49Q70CQ1 688 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 DYMQ7RTS9 669 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 ZNF280BQ86YH2 543 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 SLC39A11Q8N1S5 342 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 ZFP42Q96MM3 310 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 REEP2Q9BRK0 252 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 CCDC94Q9BW85 323 aaPredicted RBP9.17□□□□□ -0.94
PGBD2-203ENST00000462488 COLEC11Q9BWP8 271 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 PDZD7Q9H5P4 517 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 PARVGQ9HBI0 331 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 NGRNQ9NPE2 291 aaKnown RBP9.17□□□□□ -0.94
PGBD2-203ENST00000462488 DNAJB4Q9UDY4 337 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 ODF2LQ9ULJ1 636 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 PCDHGC5Q9Y5F6 944 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 TDRD15B5MCY1 1934 aaKnown RBP9.17□□□□□ -0.94
PGBD2-203ENST00000462488 PLXNA4Q9HCM2 1894 aa9.17□□□□□ -0.94
PGBD2-203ENST00000462488 CHD7Q9P2D1 2997 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.16□□□□□ -0.94
PGBD2-203ENST00000462488 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.16□□□□□ -0.94
PGBD2-203ENST00000462488 NRP1O14786 923 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 CUTAO60888 179 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 DDHD2O94830 711 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 CXCL14O95715 111 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 THP07101 528 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 GALTP07902 379 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 LINC00271P0C7V0 271 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 SLC11A1P49279 550 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 NASPP49321 788 aaPredicted RBP9.16□□□□□ -0.94
PGBD2-203ENST00000462488 LIG4P49917 911 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 KCNQ1P51787 676 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 AFF1P51825 1210 aaKnown RBP9.16□□□□□ -0.94
PGBD2-203ENST00000462488 PLCB3Q01970 1234 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 HYAL1Q12794 435 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 SMC1AQ14683 1233 aaKnown RBP9.16□□□□□ -0.94
PGBD2-203ENST00000462488 ARSHQ5FYA8 562 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 EEF1DP3Q658K8 133 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 LLGL2Q6P1M3 1020 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 HAUS6Q7Z4H7 955 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 FAM178BQ8IXR5 827 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 DAW1Q8N136 415 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 VPS52Q8N1B4 723 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 LINC00301Q8NCQ3 95 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 KCNG4Q8TDN1 519 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 SPIRE2Q8WWL2 714 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 IGSF21Q96ID5 467 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 TARS2Q9BW92 718 aaKnown RBP9.16□□□□□ -0.94
PGBD2-203ENST00000462488 CCDC113Q9H0I3 377 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 TMEM134Q9H6X4 195 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 FAM13BQ9NYF5 915 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 STK17AQ9UEE5 414 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 FAM50BQ9Y247 325 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 LZTS1Q9Y250 596 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 ATP6V1DQ9Y5K8 247 aa9.16□□□□□ -0.94
PGBD2-203ENST00000462488 BRWD1Q9NSI6 2320 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 C2CD2LO14523 706 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 HNRNPDLO14979 420 aaKnown RBP9.15□□□□□ -0.94
PGBD2-203ENST00000462488 CLDN3O15551 220 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 TRAK2O60296 914 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 PPP6R2O75170 966 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 TADA2AO75478 443 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 RECQL4O94761 1208 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 YEATS4O95619 227 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 GTF2F1P35269 517 aaKnown RBP eCLIP9.15□□□□□ -0.941e-15■■■■■ 63.3
PGBD2-203ENST00000462488 DNM1Q05193 864 aaKnown RBP9.15□□□□□ -0.94
PGBD2-203ENST00000462488 GRIK3Q13003 919 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 MAPK7Q13164 816 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 PKP1Q13835 747 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 GIT2Q14161 759 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 NT5DC1Q5TFE4 455 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 ATL3Q6DD88 541 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 PTCRAQ6ISU1 281 aaPredicted RBP9.15□□□□□ -0.94
PGBD2-203ENST00000462488 MPZL3Q6UWV2 235 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 ADGRD2Q7Z7M1 963 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 ADAMTS19Q8TE59 1207 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 NOC3LQ8WTT2 800 aaKnown RBP9.15□□□□□ -0.94
PGBD2-203ENST00000462488 AUTS2Q8WXX7 1259 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 RABGGTAQ92696 567 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 DHX58Q96C10 678 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 PABPC5Q96DU9 382 aaKnown RBP9.15□□□□□ -0.94
PGBD2-203ENST00000462488 FAM212AQ96EL1 285 aa9.15□□□□□ -0.94
PGBD2-203ENST00000462488 SPATA32Q96LK8 384 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms